Haloplanus rubicundus CBA1112: DU484_15170 Help Entry DU484_15170       CDS       T05557                                  Name (GenBank) AAA family ATPase   KO K13525   transitional endoplasmic reticulum ATPase Organism haq  Haloplanus rubicundus CBA1112 Pathway haq04141   Protein processing in endoplasmic reticulum Brite KEGG Orthology (KO) [BR:haq00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     DU484_15170  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:haq03019]     DU484_15170    03009 Ribosome biogenesis [BR:haq03009]     DU484_15170    04131 Membrane trafficking [BR:haq04131]     DU484_15170   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:haq04147]     DU484_15170 Messenger RNA biogenesis [BR:haq03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Ran-mediated transport factors      DU484_15170 Ribosome biogenesis [BR:haq03009]  Eukaryotic type   Pre-60S particles    Ribosome quality control proteins     DU484_15170 Membrane trafficking [BR:haq04131]  SNARE   SNARE associated proteins    Others     DU484_15170  Autophagy   Aggrephagy    Other aggrephagy associated proteins     DU484_15170 Exosome [BR:haq04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    DU484_15170 SSDB OrthologParalogGFIT Motif Pfam:  AAA AAA_lid_3 CDC48_N CDC48_2 AAA_16 RuvB_N AAA_5 TIP49 AAA_22 AAA_2 AAA_33 AAA_14 nSTAND3 NPHP3_N RNA_helicase AAA_28 IstB_IS21 AAA_7 Mg_chelatase ATPase AAA_18 ABC_tran NB-ARC AAA_17 DUF815 Sigma54_activat AAA_3 nSTAND_NTPase5 Parvo_NS1 TsaE AAA_30 AAA_11 AAA_24 AAA_lid_PRS2_C PhoH SLFN-g3_helicase Zeta_toxin NACHT Vps4_C IPT Motif Other DBs NCBI-ProteinID:  AXG11084 UniProt:  A0A345E644 LinkDB All DBs Position 2730499..2732727 Genome browser AA seq 742 aa AA seqDB search MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGADRTAAKVWRADRQDWN TDTVRIDGFTRQNADVGIGERVTIRKAEATKAEKLVLAPPEEASVQFGSDAAGMVKRQIL KRPVVERDIVPVMSSTNHPFMRSPGQAIPLIAVETEPEGVCLVTEDTEVELREEPISGFE KTGGGITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLA KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDESPSIIFIDELDSIAPKRED VTGEVERRVVAQLLTMMDGLETRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEE GRKEILQIHTRGMPLSDDVSLDHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEE DIPPSLIDRMIVKRDDFGGALGEVEPSAMREVLVELPKITWDDVGGLDEPKEMVKEAVEW PLSSPEKFDRMGIEPPKGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGES EKAIRQTFRKARQVAPTVIFFDELDSLAPSRGNEVGNNVSERVVNQLLTELDGLEEMGNV MVIGATNRPDMIDPALLRSGRFDRLVFIGEPEQEGREQILKIHTQHSPLAPDVSLREIAE ITDGYVGSDLESIAREAAMVALREDEGAEEVEMRHFRQAMENVRPTITDDIMDYYEQIEE QFKGGGGESFASRGGGGRIGFQ NT seq 2229 nt NT seq  +upstreamnt  +downstreamnt atgaacgaagtgcaactcgaagtggcgaaagcgtacccgaacgactcggggcgtggcatc gcccgattggaccccgacacgctcctgcacctgaagctgtcgccaggtgacatcatcgag atcgagggggccgatcggacggcggcgaaggtgtggcgtgccgaccgacaggactggaac accgacacggtccgcatcgacgggttcacccggcagaacgcggacgtgggcatcggcgag cgcgtcaccatccggaaggcggaggcgacgaaagccgagaaactcgtcctcgcgccgccg gaggaggcgagcgtccagttcggctccgacgccgccggcatggtgaaacggcagatcctc aagcggccggtggtcgaacgcgacatcgtcccggtgatgtcgagtacgaaccacccgttc atgcggtcgccgggacaggccatcccgctgatcgccgtcgagacggaaccggagggcgtc tgtctcgtgacggaggacaccgaggtcgaactgcgtgaggagcccatctcgggcttcgag aagaccggcggcggcatcacgtacgaggacatcggcggcctgcaaaacgagatccagcgc gtccgggagatggtcgaactcccgatgaagcacccgcagatcttcaagaagttggggatc gaacccccgcagggcgtcctcctgcacgggccgccggggaccgggaagaccctgctggcc aaagcggtcgccaacgaaacctccgcgtccttcttctccatcgcggggccggagatcatc tcgaagtactacggcgagtccgaacagcagttgcgcgaaattttcgaggacgccaaagac gagtcgccgtcgatcatcttcatcgacgaactcgactccatcgcgcccaagcgtgaggac gtgaccggcgaggtcgaacgccgggtcgtcgcccaactgctgacgatgatggacggcctc gaaacccgggggcaggtcatcgtcatcgcggcgaccaatcgggtggattccgtggatccc gcgctccgtcgaccggggcggttcgaccgcgaaatcgaaatcggcgttccggacgaggaa ggacggaaagagatcctccagattcacacgcgcggtatgccgctttccgacgacgtgagc ctcgatcacctcgcggacgagacccacggcttcgtcggcgccgacatcgagagcctgacg aaggaggccgcgatgaaggcgctccggcggtacctccccgagatcgatctggacgaggag gacatcccgccgagcctcatcgaccggatgatcgtcaagcgcgacgacttcggcggcgcg ctcggcgaggtagagccctccgcgatgcgggaggtgctggtcgaactcccgaagatcacg tgggacgacgtgggcggcctcgacgagcccaaagagatggtcaaggaggccgtcgagtgg ccgctctcctcgccggagaagttcgaccgcatggggatcgaacccccgaagggcgtcctc ctgtacgggccaccggggaccgggaagacgctgatggcgaaggcggtggccaacgagacc aacgccaacttcatcagcgtgcgcggcccgcagttgctgtcgaagtgggtcggcgagagc gagaaggccatccggcagacgttccggaaggcccggcaggtggccccgacggtcatcttc ttcgacgaactcgactcgctcgcgccgtcgcggggcaacgaagtgggtaacaacgtctcc gagcgcgtcgtcaaccagcttctgaccgaactcgacgggctggaggagatgggcaacgtc atggtcatcggcgcgaccaaccggccggatatgatcgaccccgccctactccggtctggc cggttcgaccgcctcgtgttcatcggcgaacccgagcaggagggtcgcgagcagatcctg aagatccacacgcagcactcgccgctcgcccccgacgttagcctccgggagatcgccgag atcaccgacggctacgtcggctccgacctggagagcatcgcccgcgaggcggcgatggtc gcactccgcgaggacgagggggccgaagaagtcgagatgcgacacttccggcaggccatg gagaacgtccggccgacgatcacggacgacatcatggactactacgaacagatcgaagaa cagttcaagggcggtgggggcgagagcttcgccagccgtggtggcggcggccggatcggc ttccagtag

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