Haloplanus rubicundus CBA1112: DU484_15290
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Entry
DU484_15290 CDS
T05557
Name
(GenBank) PKD domain-containing protein
KO
K20276
large repetitive protein
Organism
haq
Haloplanus rubicundus CBA1112
Pathway
haq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
haq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DU484_15290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
CARDB
Beta_helix
K319L-like_PKD
NPCBM_assoc
Dockerin_1
NosD
Big_9
Motif
Other DBs
NCBI-ProteinID:
AXG11105
UniProt:
A0A345EFY3
LinkDB
All DBs
Position
complement(2756609..2764099)
Genome browser
AA seq
2496 aa
AA seq
DB search
MVAGGDERRRAIDGRSLADTELLEGYAWTTATEGNADATVRNRTALDLRVYRCSYANATA
SLGSVSGTLRWSALTNVTVTGDYWETPFIEVREDGREVAAFSFEKRSGTIVRGTEGSVDV
DGNVTVTVGIDPSDPCSNADHEDTYFSLRGLSFSVGPENETGTIVVDDDGGPGADYTAIQ
PAVDAAAPGAVVEVREGTYRESIRVNESITIRGPNAVVDGTNLGDTPGLLITGDDAAPTV
EGLTVDGHRNSGILVRGPVGAFRLRDVTVTNTTRGDLEFDGHAIKVTGASSNWSITDSTV
RNNEGAGISVNTEGGWRIENTTVRNNGDDGIEVEGSVRTLTGSTNVSTASEGVGSWTISG
VTVADNRLVGISVDDSSANWTIRDVTVTDTYAIIVGESLGDWTVRDSVIDADDRGLNVFR
AAGDWTVRDVRIASNRTAVGIRRVGEAGPVVTGNWTIRDARITAGRVGISMDTRFPRDSQ
SVPGNWTVRNASIEAGRIGIDASRLGRNGTVRGSSIEAGGVGLNAVRTGGDWTLDDSRVT
DAGRAVAARNATGNWTVRESILRNYIAGVVATNTTGRWNIERSVLDARFFDGDDATVDIA
GGTGGPTGDATRNWWGGTPESPDSPDCQGNVDCSAPLEEPPAVGSLNVAVTDADADPGTS
EQITVQLTNGNSRPVRDLRLNLSEMPAGWNVTRFYGGAGTWDRESRVWTLDRLDAGATTE
PAVAVSVPADAASRRYSVVGSLTADGRIVDTVTADVVVDRVNADNATLDLALAGGSVRAG
NETTVGALVTNIENRTVTGDLGLRVTEVPSSWSVSPTVADGGSWTARNWSIESIATGRSK
APRFSVAVPAGTTSGTYFVRARAYAGGRPVDSAVAVVTVTDGNGPPDALFRVEGITSGNQ
SATRTRTQAIAVPPRTVRLNASSSTDSDPDGSIRSYEWDTDGDGDTDATGRTVPYEPPPQ
GNGTVSLTVTDDEGATDTRTQSIGVSRNRPPAAVADVSAETIGTGVPVQFVANEDLARED
LETRVIRYEWDVGDDGDVDHTGRSFERSFDSPGTYDVRLTTVDTGGAEGTAVVTVEVVPG
NRTPEADFSVIPADRQDRIGDLRSALTTSDGEEFLIDETLAFRSESSAPGNRTIVNHAWR
LGDGSEKSGRPVYHAYSFSGTYEVTLTVTDTTGVSDTVTKEVEISQREEPRIVALERSRG
GRTLENVELYENFTAVVSSDEPVDRVEFRLEDSNRRFLETVRSSDGRDYTARFNLGRLED
DATIEATVYQTDGDTHSVTRRVDVLSVPDWLLTFARFGNLTVSEQPGTGYTLVRYSRYFP
DRSGFETTVNAPVPVVGGKQNISARGRVAVLYVMDIGRLDVAGGGRLKGKVLGRSAKGRV
TVGGTANLPPPRWEFQRARVEFTGTIRALSKTFSVSNSYGPRATVKVGPKLTIVIVVDLT
GDDTEVVGRYIEPALDADGKFTGADVTVASLSGTADGELAGRISIPELNPSARALLRADP
DLVIGSGWAKTEVCCAPVEYSDMIALRAGSQIPGQPPVETDEQSGDRAVSQPSSVLGSRV
DGRRLTADRVSDRLPSVADLGAGYVVVWSRQDPSKPAPVGSEVYATRVTETEDDGRPPRA
RLTDDRRFDSFPSVAGQPESGDAFAAWVRSDDVLTEADRANASQLLERFEIAYAPTRADG
WAAPTLATDNRVADLPPTVVGDDGRYLVAWTQDVDRNLTTRDDRRVRYAVYDDGSLGSIR
TIDDATAVDANAGGGFVLAYRTDNESIVRARLDDGTLETTDSYPAEGPRSIAAGPRGVAW
VETGSWGTIRYARNGTISRVPNGNVTDVSDVELFADGGRPVVTYRAIPNGSLNATLYYRR
LAAPQTWTGSSIAGGREANATIREVAVASDAEGFLTAFTAGDARGRIAPDVFATSHAYRP
DLTVTARAETDDRPDAGGRVTLTYTVENTGARPADSATLAVEGRRGTLATRRIPRLDPSE
QVTRNVTVARDGTGTLSIEVDPGNGIVERNESNNNATVVFARPDLFVGRIDERRDDELLV
DVEIVNGGSVATRNVTVRLSRENDSWTETIPYVGPNRTATARIGVELAAETNTSSKTLPT
NGSSVVRVAVDPNDRIDEADERNNDRVGVVLHPDIGVVAPTIRAYEDPQGSRIEFALRNG
DTGSGPVRVTTTIGNASRTYVVSVPPADDADGARYRPVSLAAPESAETADAAVSVRTAPV
DGVDAAPFDDIGSASPSIEPASNASATPLAIANATGRIVDGNLGLTLTLNNTGSLTTGEV
VTVRQNGTVRARRPVAIAPGARTVTLRTNVTPSNGSYTVTTAADTATIEVSSPTPPSVMA
TLPFDTNNVGAPIRIDVEATDNDRVREIRLVAPDGTSVDTLSCGTATCEGSVSTTPAESS
WNDSTGGYDNRSYRVVAVDDEGATDSTTVQTEVSIAGDVNGDGVVDIFDAVMVGRAWQAT
RGDDGYADAADLNNDGVIDIFDAVAIGRNWQDRAGV
NT seq
7491 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgccggtggcgacgagcgacggcgggcgatcgacggccgctcgctcgccgacacc
gagttactcgagggctacgcctggacgacggcgaccgagggcaacgccgacgcgacggta
cgcaatcggacggcgctggatcttcgggtgtaccgctgttcgtacgccaacgcgactgcc
tcactggggtcggtctcgggcaccctccgctggtcggcgctgaccaacgtcacggtcacc
ggcgactactgggagacgccgttcatcgaggttcgcgaggacggacgggaagtcgctgcg
ttctcgttcgagaagcgatccgggaccatcgtcaggggtaccgaggggagcgtcgacgtc
gacggcaacgtcaccgtcaccgtcggcatcgatccgtccgacccctgtagcaacgccgac
cacgaggacacgtacttcagcctccggggtctgtcgttctccgtcggcccggagaacgag
acgggaacgatcgtcgtcgacgacgacggcggacccggggcggactacaccgccatccag
ccggccgtcgacgccgccgctcccggtgcggtcgtcgaggttcgcgaggggacctaccgg
gagtccatcagggtgaacgagtcgatcacgatccgcgggccgaacgccgtcgtcgacggc
acgaacctcggcgacacgccgggactgctgatcaccggggacgacgccgcgccgacggtc
gagggactgaccgtcgacggacaccggaacagcggcatcttggttcgcgggccggtcggg
gcgttccggttgcgagacgtcaccgtcaccaacacgacacgcggggacctcgagttcgac
ggacacgcgatcaaagtaaccggcgccagcagtaactggtcgatcaccgactccacggtt
cgaaacaacgagggtgcggggatttcggtcaatacggagggtgggtggcggatcgagaac
acgaccgtccggaacaacggggacgacgggatcgaagtcgaaggcagtgtccgcacgttg
actggttcgacgaacgtctcgaccgccagcgagggcgtcggttcctggacgatcagcggc
gtcaccgtggcggacaacagactcgtcggcatcagcgttgacgactcctccgcgaactgg
acgatacgggatgtcaccgtgacggacacctatgcgatcatcgtcggcgaatcgctcggc
gactggacggttcgcgactcggtgatcgacgccgatgatagaggtctgaatgtctttcgt
gccgccggcgactggacggtccgggacgtgcggatcgcctccaaccgtaccgccgtcggg
atcagaagggtcggggaagctggacccgtcgtgacggggaactggacgatccgagacgcc
cgaatcaccgccggtcgcgtgggcatctcgatggatacccgcttcccgagagattcccag
tccgtccccggtaactggaccgtccgcaacgcctctatcgaggccggaaggatcggcatc
gacgcgagtcggctcggcagaaacggaacggttcggggcagttcgatcgaggcggggggc
gtcggtctgaacgccgtccgcaccggcggcgactggacactcgacgactcgagggtcacg
gacgcggggagggccgtcgcggctcgaaacgcgaccgggaactggaccgttcgcgagagc
atcctgcgaaactacatcgccggcgtggtcgcgacgaacacgaccggccgatggaatatc
gagcggagtgtgctcgacgcgcgtttcttcgacggcgacgacgccaccgtcgatatcgct
ggcggcaccggcggtccgacgggcgacgccacgcgcaactggtggggcggcacccctgaa
agcccggattcgcccgactgccagggcaacgtggactgttcggcgcccttagaggagccg
ccggccgtgggttcgttgaacgtcgcggtgaccgacgccgacgccgatcccggcacctcc
gagcagatcaccgtccagttgaccaatgggaactcccgtccggtccgtgatctccggttg
aacctgtcggagatgcccgccggatggaacgtcacccgcttctacggtggggccggcacc
tgggaccgggagagtagagtctggacgctcgaccgactcgacgcgggcgcgacgaccgag
cccgcggttgccgtgtcggtgcctgccgacgcggcgtcgcggcgctactccgtggtcgga
agcctcaccgccgacggccggatcgtcgataccgtcaccgccgacgtggtcgtcgaccga
gtgaacgcggacaacgccaccctagatctcgcgctcgccggtgggtcggttcgggcgggc
aacgagaccaccgtcggcgccctcgtcaccaacatcgagaatcgaaccgtcacgggcgat
ctcggactacgggtgaccgaggtaccgtcgtcttggtcggtgtcaccgaccgtcgccgac
ggcggctcctggaccgctcggaactggtcgatcgagtcgatcgccaccggtcggtcgaag
gcgccccgattttcggtcgcggttcccgcaggtaccaccagcggcacgtacttcgttcgt
gcgagggcctacgccggcggccgcccagtcgacagtgcggtcgccgtcgtcaccgttacc
gacggcaacggtccgcccgacgcgctgttccgggtcgagggaatcaccagcggtaaccaa
tccgcgacacggacgcggacgcaggcgatcgccgtcccaccgagaactgtcagactgaac
gccagctcgtcgacggacagtgatccggacggctcgatacggagctacgagtgggatacg
gacggggacggtgacacggacgcgacgggtcggacggtcccgtacgaaccgcccccgcaa
ggtaacgggacggtgtcgttgaccgtgaccgacgacgagggcgcgacggacacgaggacg
cagtcgatcggcgtgtcgagaaacaggccgcccgcggccgtcgccgacgtctcggccgag
acgatcggcaccggcgttccggtacagttcgtcgcgaacgaggatctggcgcgtgaggat
ctcgaaacacgcgtcatcaggtacgagtgggacgtcggcgacgacggggacgtagaccac
accggccgaagcttcgagcggtcgttcgacagcccggggacgtacgacgtgcggctgacg
accgtcgacaccgggggtgccgaagggacggcggtcgtgaccgtcgaggtggtccccggt
aatcggactccggaggccgacttttcggtcatcccggcggacaggcaagatcggatcggt
gatctgcgatcggcgctgaccacgagcgacggggaggagttcctcatcgacgagacgctg
gcgttcagaagcgagtcgtcagcccccggtaacaggaccatcgtcaatcatgcgtggcga
ctcggcgacggctccgagaagagtggtcgaccggtgtatcacgcgtactcgttctccggc
acgtacgaggttacgctgaccgtgacggataccacgggtgtctccgacacggtcacgaag
gaggtagagataagccagcgcgaggaaccccggatcgtggcgctcgaacggagtcgcggc
ggccgaacgctcgaaaacgtcgaactctacgaaaacttcaccgcagtcgtttcgtccgac
gagcccgtcgaccgcgtcgagttccgactggaggactcgaaccggcgattcctggaaaca
gtcagatcgagcgacgggcgggactacaccgcccggttcaacctcggccggctcgaagac
gacgccaccatcgaggcgaccgtgtatcaaaccgacggcgatacccactcagtcactcgt
cgcgtcgacgtgctgtcggtgcccgactggttgctgacgttcgctcgattcgggaatctc
acggtgtctgagcaacccggaaccggctacacgctcgtcagatacagtcgatatttccca
gaccgaagcggttttgagacgacggtgaacgcgccggttccggtcgtcggcggcaaacag
aacatcagcgcccgggggcgggtcgcggtcctgtacgtgatggacatcggccgactcgac
gtcgccggcggcggccgactgaaggggaaggtactcggtcgctccgccaagggtcgcgtc
acggtcggtggcacggccaacctcccgccgccgaggtgggagttccagcgggcacgggtc
gagttcaccgggacgatcagggcgctctcgaagacgttctcggtgtccaacagctacggc
ccacgggccacggtcaaggtcggcccgaagctgacgatcgtgatcgtcgtcgatctcacc
ggcgacgacacggaggtggtcgggcggtacatagagccagcactggatgccgacgggaaa
ttcaccggtgcggacgtaaccgtggcctcgctcagtgggacggcagacggggaactggct
ggccggatcagcatcccggaactgaatccgtcggctcgggcactacttcgcgccgatccg
gatctcgtgatcggatccggctgggcaaaaacggaggtgtgctgtgcgcccgtcgaatac
tccgacatgatcgcgctgcgtgcgggatcgcagatcccgggtcagccgcccgtcgaaacc
gacgagcagtcgggtgatcgtgccgtcagccagccttcgtccgtgctgggctcacgggtc
gacgggcggcgtctcacggccgaccgggtgagcgaccggctgccgtccgtcgcggatctg
ggcgccggatacgtcgtggtctggagccggcaggatccctcgaaacccgcgcccgtcgga
tcggaggtgtacgccactcgcgtcaccgaaaccgaggacgacggccgaccaccccgggcc
cgactcaccgacgaccggcggttcgactcgttcccgtcggtcgccggccagccggagagc
ggcgacgcgttcgccgcgtgggttcgcagcgacgacgtgctgaccgaggcggacagggcg
aacgcgtcgcagctgctcgaacggttcgaaatcgcctacgcaccgacgcgcgccgacggt
tgggccgccccgacgctagctaccgacaaccgtgtcgccgaccttccgccgactgtcgtg
ggcgacgacggtcgctacctcgtcgcgtggacacaggatgtcgaccggaacctcaccact
cgcgacgaccggcgggttcgatacgccgtctacgacgacggctcgctcgggtcgatccgg
acgatcgacgacgccacggccgtcgacgcgaacgccggcggcgggttcgtgttggcctac
cgcaccgacaacgaaagcatcgtccgtgcccgactcgacgacgggacgctggagacgacc
gacagctacccggccgaggggccgcggtcgatcgcggctgggccacggggcgtcgcgtgg
gtcgaaaccggatcgtgggggacgatccggtacgcccgtaacgggacgatcagtcgggtt
ccgaacggaaacgtgaccgatgtctccgacgtcgaactcttcgccgacggtggccgtccg
gtcgtcacgtaccgggcgataccgaacggatcgctgaacgcgacgctgtactaccgacgg
ctggcggctcctcaaacgtggaccgggagctcgattgccggcgggcgcgaggcgaacgca
accatccgcgaggtagctgtcgcgtccgacgccgagggattcctgaccgcgtttaccgcc
ggagacgcccgcggacggatcgccccggatgtgttcgccaccagccacgcctatcgaccg
gatctgaccgtgacggctcgagcggagacggacgaccgcccggatgccggcggacgcgtc
acgctgacgtacaccgtcgaaaacacgggcgcccgaccggcggacagtgcgacgctagca
gtcgaggggcgtcgcgggacgctggccacgcgccggatcccgcgactggatcccagcgag
caggtgacgagaaacgtcaccgtcgctcgcgacggaacgggcaccctctcgatcgaggtc
gatcccgggaacgggatcgtcgaacgcaacgaatccaacaacaacgcgacggtagtgttc
gcacggccggacctgttcgtcggccgaatcgacgaacgccgcgacgacgaactactcgtc
gacgtcgagatcgtaaacggtggttcggtcgccacccggaacgtcaccgtccggctctcg
agggagaacgatagctggacggagacgattccgtacgtcgggcccaatcggacggcgacg
gcacggatcggcgtcgaactcgcggcggagaccaacacgtcgtccaagacgctcccgacg
aacggatcctcggtggtgcgtgtcgcggtcgatccgaacgaccggatcgacgaagccgac
gaacgcaacaacgaccgagtcggggtggttctccaccccgatatcggcgtggtcgcgccc
acgattcgcgcctacgaggatccgcagggaagccgcatcgagttcgccctccggaacggt
gataccggaagcggccccgtccgggtgacgacgacaatcgggaacgcgagccgaacgtac
gtcgtgtcggttccgccggccgacgacgccgacggcgcccggtaccgcccggtgtcgctc
gcggccccggaatcggccgaaacggcggatgcggccgtgagcgttcggacggcgcccgtc
gacggcgtcgatgccgccccgttcgacgacatcggtagcgcaagtccgtcgatcgaaccg
gcgtcgaacgccagtgcgaccccactcgcgatcgccaacgccaccggtcggatcgtcgac
gggaacctcggactcacgctcacgctgaacaacaccggctcgctgaccaccggcgaggta
gttaccgtgcgccagaacgggacggtccgcgcgcgacggccggtggcgattgcaccgggg
gcccggacggtcacgctccgaacgaacgtgacgccatcgaacggatcgtacaccgtcacg
accgccgcggacacggccacgatcgaggtgtcgtccccgacgccaccgtcggtaatggcg
acgctaccgttcgacacgaacaacgtgggggcgccgatccggatcgacgtcgaagcgacc
gacaacgaccgcgtacgggagatccgactcgttgccccggacggaacgtcggtcgacacg
ctgtcgtgtgggaccgcgacctgcgaggggagcgtctcgacgactcccgccgagtcatcc
tggaacgactcgaccggcgggtacgacaaccggtcctaccgcgtcgtcgcggtcgacgac
gagggtgcgaccgattcgacgaccgtccaaaccgaggtgtctatcgcgggcgacgtgaac
ggcgacggcgtggtcgacatcttcgatgcggtgatggttggacgggcgtggcaggctacc
cgtggtgacgacggctacgcggacgcggccgacctgaacaacgacggcgtgatcgacatc
ttcgacgcggtagcgatcggccggaactggcaggatcgggcgggcgtctga
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integrated database retrieval system
