KEGG   Haloplanus rubicundus CBA1112: DU484_16290
Entry
DU484_16290       CDS       T05557                                 
Name
(GenBank) replication factor C large subunit
  KO
K04800  replication factor C large subunit
Organism
haq  Haloplanus rubicundus CBA1112
Pathway
haq03030  DNA replication
Brite
KEGG Orthology (KO) [BR:haq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DU484_16290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:haq03032]
    DU484_16290
DNA replication proteins [BR:haq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     DU484_16290
SSDB
Motif
Pfam: AAA RCF1-5-like_lid AAA_30 AAA_lid_RFC1 RuvB_N AAA_16 AAA_assoc_2 AAA_22 nSTAND3 AAA_33 DNAX_ATPase_lid AAA_28 Viral_helicase1 RNA_helicase AAA_14 Zeta_toxin AA_kinase NACHT Hydin_ADK IstB_IS21 Rad17 AAA_5 RsgA_GTPase
Other DBs
NCBI-ProteinID: AXG11283
UniProt: A0A345EGG1
LinkDB
Position
complement(2956204..2957664)
AA seq 486 aa
MTDWTEKYRPSTLSAVRGNDKARDALAEWAKTWDDHREAVVVHGSPGVGKTSAAHALATD
MGWETVELNASDQRTADVIERFAGRAAQNATLVGSVGGGDDDGRQLVILDEADNIHGNYD
RGGASAVTRVVKDAGQPIVLIANDYYDMGRGLRNACREIEFRDVSARSIVPVLRDICRRE
DVEFEADALDRIAEINDGDLRSAVNDLQAAAEDDRRLTVDDVVTSDRDRSLGVFPFLDAV
LKEESPEEAIGSAYRVDETPDDLTKWIAENVTKVYDGAELARAYDHLANADRWLGRVRAS
QEYGYWRYATDALAGGVAASRDGSKGGWTRFNRPQFWPSSDSTADEVVRKVAENGGFSMA
TARREVIPFLAAMTHHCKPRELTVAMAAYYGLDEAAVSFVTGSGETTNKVESIVADAEEL
REAEMEEHSGAFGGAVTTDGTVDTEADADAADDGSVVDEADGETATADSDTEADADDGQS
GLSDFM
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgaccgattggacggagaagtaccgcccatcgacgctgtcggcggtccgggggaacgac
aaggcccgcgacgcgctggcggagtgggcgaagacgtgggacgaccaccgcgaggcagtc
gtcgtccacgggagtccgggcgtcggcaagacgtcggcggctcacgcgctggcgaccgac
atggggtgggagacggtcgaactcaacgcctccgaccagcggacggccgacgtgatcgaa
cgcttcgcggggcgagcggcgcagaacgcgacgctcgtcggatcggtcggcggcggtgac
gacgacggtcgacagctcgtgatcctcgacgaggccgacaacatccacggcaactacgac
cgcggcggggcgagcgcagtcacgcgcgtggtgaaagacgccggccagcccatcgttctg
atcgccaacgactactacgacatgggtcgggggctgcgcaacgcctgccgtgaaatcgaa
ttccgcgacgtgtcggcgcgctccatcgtccccgtcctccgggacatctgccggcgcgag
gacgtcgagttcgaggccgacgccctggatcgcatcgccgaaatcaacgacggcgacctg
cgttcggcggtaaacgacctgcaggcggccgcggaggatgaccgtcgcctgacggtcgac
gacgtggtgacgagcgaccgcgatcggagtctcggggtctttcccttcctcgatgcggtg
ttgaaagaggagtcccccgaggaggccatcggctccgcgtaccgcgtcgacgagacgccg
gacgacctgacgaagtggatcgccgagaacgtcaccaaagtgtacgacggggcggaactc
gcgcgggcgtacgaccacctcgcgaacgccgaccggtggctggggcgggtacgcgccagc
caggagtacggctactggcggtacgcgaccgacgccctcgctggcggcgtggcggcgtcc
cgcgacggatcgaagggtggatggacgcggttcaaccggccgcagttctggccgtcctcc
gattcgacggccgacgaggtggtccgcaaggtggccgagaacggcggattcagcatggcg
accgctcgccgcgaggtcattcccttcctcgcggcgatgacccaccactgcaagccccgt
gaactgacggtagcgatggccgcctactacggcctcgacgaggcggcggtgtctttcgtc
accgggagtggcgagacgacgaacaaagtggagtccatcgtcgcggacgccgaggagctt
cgcgaggccgagatggaggaacactcgggggcgttcgggggcgcggtgacgacagacggg
accgtggataccgaagcggacgccgacgcggcggacgacggcagtgtcgtggacgaggcc
gacggcgagactgccactgccgattccgataccgaagcggacgccgacgacggccagtcc
ggtctctcggatttcatgtga

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