Haloplanus rubicundus CBA1112: DU484_17990
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Entry
DU484_17990 CDS
T05557
Name
(GenBank) RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
haq
Haloplanus rubicundus CBA1112
Brite
KEGG Orthology (KO) [BR:
haq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haq03016
]
DU484_17990
Enzymes [BR:
haq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DU484_17990
Transfer RNA biogenesis [BR:
haq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DU484_17990
Prokaryotic type
DU484_17990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
DKCLD
PUA
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AXG11594
UniProt:
A0A345EHC2
LinkDB
All DBs
Position
complement(3289103..3289975)
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AA seq
290 aa
AA seq
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MTRLRPPPAERDLDALLAFGVVNLDKPPGPSAHQVAGWVRDLAGVDRAAHAGTLDPKVTG
CLPTMLGDATRLAPVFLEGRKEYVAVLELHDRPPADLEATVAEFEGEIYQKPPRKSAVAR
RLRTRTIHDLDVLETRDRQVLLRIECASGTYIRKLCHDLGLALGTGAHMGALRRTATDPF
DDRDLVTLHDLADALAFAEEGDEEPIRAVVAPAERVLEELPAVTIAPSAAEQVATGAPVY
APGVIDAEPAEQDALVAGFTPNGSAVCLGRFVGDPDADEGVVVDLERVLV
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
gtgacccgcctccgccccccgcccgcggagcgcgacctcgacgccctcctcgcgttcggc
gtcgtcaacctcgacaaaccccccggcccctccgcccaccaggtcgcggggtgggtgcgc
gacctcgccggcgtcgaccgcgccgcccacgccggcaccctcgacccgaaggtgacgggc
tgtctccccacgatgctcggcgacgccacccggctcgcccccgtctttctggagggccgc
aaggagtacgtcgccgtcctcgaactgcacgaccgtccgccggccgacctcgaagcgacc
gtcgccgagttcgagggcgaaatctaccagaaaccgccgcgcaagagcgccgtcgcgcgc
cgcctccgaacccggacgatccacgatctggacgtcctcgaaacccgcgaccgacaggtc
ctcctccggatcgagtgtgcgagcggcacctacattcgcaagctctgtcacgacctcggc
ctcgcgctcgggaccggcgcgcacatgggcgcgctccgccgcaccgcgaccgaccccttc
gacgaccgggacctcgtcaccctccacgacctcgccgacgccctcgccttcgccgaggag
ggcgacgaggagccgatccgggcggtcgtcgccccggcggagcgggtgctcgaagagctg
ccagcggtgacgattgccccgagcgccgccgaacaggtggcgacaggggcgccggtgtac
gcgccgggcgtgatcgacgcggagccggccgaacaggacgccctcgtcgccggtttcacc
ccgaacgggtccgccgtctgtctcggccgcttcgtcggtgaccccgacgccgacgagggc
gtcgtcgtcgacctggagcgggtgctggtctga
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