Haloplanus rubicundus CBA1112: DU484_18080
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Entry
DU484_18080 CDS
T05557
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
haq
Haloplanus rubicundus CBA1112
Brite
KEGG Orthology (KO) [BR:
haq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
haq03032
]
DU484_18080
03036 Chromosome and associated proteins [BR:
haq03036
]
DU484_18080
03400 DNA repair and recombination proteins [BR:
haq03400
]
DU484_18080
DNA replication proteins [BR:
haq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DU484_18080
Chromosome and associated proteins [BR:
haq03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DU484_18080
DNA repair and recombination proteins [BR:
haq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DU484_18080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AXG11921
UniProt:
A0A345EI99
LinkDB
All DBs
Position
3307306..3307890
Genome browser
AA seq
194 aa
AA seq
DB search
MNKAELIEAMASEAGLSKADAKRTVDAITGATTKALKKGDRIAVVGFGSFRTSKRAARAE
AAGKQTTVRFEPCPAFAAALDLSPGKGDDRRNQSCPAERTADLVVDAALIASETRRGSDR
GLSEATAGKALDAFVDATAAALRGDDDVTLAGFGSFSISKRSARTGRNPQREKESSAKNE
VKFKAGAELSKAVN
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcggagttgatcgaggccatggcgagcgaggccggcctctcgaaggcggac
gcgaaacgcacggtggacgccatcaccggcgcgacgacgaaggcgctgaagaagggtgac
cggatagcggtggtcggcttcggctcgttcaggacctccaagcgcgcggcacgggccgag
gctgccggcaagcagacgacggtccgcttcgagccgtgcccggcgttcgccgccgcgctg
gatctgagcccggggaagggcgacgaccgccggaatcagtcgtgcccggccgaacggacc
gccgacctcgtcgtcgacgcggcgctgatagcgagcgagacgcgccgtggctcggatcgt
gggctgtccgaagcgactgcggggaaggcactcgacgccttcgtcgacgcgacggcggcg
gcgttgcgcggggacgacgacgtcacgttggcggggttcggatcgttcagcatctccaaa
cggtcggcacggaccggccggaatccacagcgcgagaaggaatcctcggccaagaacgaa
gtcaagttcaaggccggagccgaactctccaaggcggtcaactga
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