Haloplanus rubicundus CBA1112: DU484_18625
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Entry
DU484_18625 CDS
T05557
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
haq
Haloplanus rubicundus CBA1112
Pathway
haq03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DU484_18625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haq03021
]
DU484_18625
Transcription machinery [BR:
haq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DU484_18625
Prokaryotic type
Archaeal type
TFB
DU484_18625
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Ribosomal_S27
Zn_ribbon_3CxxC_2
Motif
Other DBs
NCBI-ProteinID:
AXG11931
UniProt:
A0A345EIA9
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All DBs
Position
pCBA1112-02:complement(8212..9330)
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AA seq
372 aa
AA seq
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MSQDAHENTDTTTHSTDSASAGSGSPTPVSTRLRQNQQQTQSCSSETASKGEQSKATDSE
STDELQCPECATDEYLVIDEEETYCGECGLVLVRDILDRRLRWVDTGDGREPERGGAPTT
HRLHHKGLPTEIGYNIDGYDRPLSRQTKRRFRRLRKWDSRSKTGSSRDRSLRLGLGEIAR
LISALELSGSIHDRVADLYREVCEKEMLAGNSIEGMASACVYAACRLERLPRTLKEIGEV
ARVDTKEINQDYKCLNQDLELATPPPLPQDYIPRLASAVDASPRLERRAYQLSRSNAVGV
LANGRQPNGVAAACLYHASKESRRSNVRLTQRTLAEEGYTTPTTLRKLWRELKALADDGK
LPDPDGDPDYFS
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagacgcccacgagaacactgacactacaacccatagtaccgactcggcttcc
gccgggtcggggtctcccactcccgtctcgacgcgcctcaggcagaaccagcagcagact
cagtcatgctccagcgagactgcctccaaaggcgagcagtcgaaagccacggactcggaa
tcgaccgatgaactacagtgtcccgagtgcgcaaccgacgagtacctcgtcattgacgag
gaggaaacctactgtggggaatgtggcctcgtactcgtccgtgacatcctcgatcggcgc
cttcgctgggtcgatactggggacggccgtgaacccgaacgtggcggcgctcccaccacg
catcgcctccatcataaggggctcccgacggagatcggatataacatcgacgggtacgac
cgcccgctgtcgcgtcagaccaaacggcgtttccgtcgactccgtaagtgggatagtcga
tcgaaaaccggctcgagtcgcgaccgctcgctccgcctcggcctcggcgaaatcgctcgc
ctcatcagtgcgctcgaactctccggctctatccacgaccgcgtcgctgacctctaccgc
gaggtgtgtgagaaagaaatgctcgctggcaactccatcgaaggcatggcgagcgcctgt
gtgtacgctgcttgccgtctcgaacgcctgccacgcacgctcaaagagattggtgaagtc
gctcgtgtcgatactaaagaaatcaatcaggactacaaatgcctaaatcaagatcttgag
ctcgcaacgcctccaccactcccgcaggactacatcccacgactcgcgagtgccgttgat
gcctcccctcgtctcgaacgccgtgcctaccagctctccagatcgaacgctgtgggtgtc
ctcgcgaacggccggcaaccgaacggcgtcgccgcagcgtgtctctaccacgcttccaaa
gagagtaggcgaagcaacgttcgactcacccagcgaactcttgcggaggaaggttacacg
accccgacgacgcttcgtaagctctggagggaactcaaagccctcgctgacgacgggaaa
cttcccgatccagacggcgaccccgactacttctcatga
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