Herminiimonas arsenicoxydans: HEAR0221
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Entry
HEAR0221 CDS
T00490
Symbol
fadD
Name
(GenBank) Long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA synthetase)
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
har
Herminiimonas arsenicoxydans
Pathway
har00061
Fatty acid biosynthesis
har00071
Fatty acid degradation
har01100
Metabolic pathways
har01212
Fatty acid metabolism
har02024
Quorum sensing
har04146
Peroxisome
Module
har_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
har00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HEAR0221 (fadD)
00071 Fatty acid degradation
HEAR0221 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HEAR0221 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
HEAR0221 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
har01004
]
HEAR0221 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
har04147
]
HEAR0221 (fadD)
Enzymes [BR:
har01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HEAR0221 (fadD)
Lipid biosynthesis proteins [BR:
har01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HEAR0221 (fadD)
Exosome [BR:
har04147
]
Exosomal proteins
Exosomal proteins of breast milk
HEAR0221 (fadD)
Exosomal proteins of breast cancer cells
HEAR0221 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
CAL60450
UniProt:
A4G1R3
LinkDB
All DBs
Position
218004..219686
Genome browser
AA seq
560 aa
AA seq
DB search
MDKFWLQSYPKGVPAEIDFTQYDSLVELLEESFRKYADRHAYVCMDKFLTYAEVDTLSQK
LGAWLQGTGLQKGARVALMMPNVLQYPVALAAVLRAGYVVVNVNPLYKPRELQHQLVDSG
AEAIIILENFATTLEKIIVSTQIKHVVVATMGDMLGGLKGLLVNFVVRHVKKMVPAFSLP
QAVSFKDVLAQAAHMHLQRPLLGPQDIAFLQYTGGTTGTAKGAMLTHRNIVANILQNEAW
IWPVLRKEPPDKTLNFVCALPLYHIFALTACCMLGTRLGVMNILIPNPRDIPSLVKELMK
YKINLLPAVNTLYNGLLNNPDFAKVDFSELKLCNGGGMAVQQVVNDRWRVVTGCSIIEGY
GLSETSPVATSNPVETTEFSGTIGLPVPSTEVMILDSNDNEVALGLSGEIAIRGPQVMAG
YWNNPAETAQAMTADGFFKTGDIGVMDARGYTRIVDRKKDMILVSGFNVYPSEIENVVAG
HPGVLECACIGVPDEHTGEAVKLFVVRRDPALTAEALMAFCKEQFTGYKKPKMIEFRTEL
PKSNVGKILRRELRDEIKTT
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggataaattttggctgcaatcatatccgaagggcgtgccggcagagattgatttcacc
cagtacgattcgctggtggagctgctggaagagtcgttccgcaaatacgccgatcgtcac
gcgtatgtctgcatggataaattcctgacctacgctgaagtcgatacgctctcgcaaaaa
ctgggcgcatggctgcaaggcacaggcttgcaaaaaggcgcacgcgtggcgctgatgatg
ccgaatgtattgcagtatccggttgcgctggccgctgtgttgcgtgccggctatgtggtc
gtcaatgtcaatcccttgtacaagccgcgcgagctgcagcatcaactggtcgattccggt
gcggaagcaattattattctggagaatttcgccactacgctggaaaagataatcgtcagc
acgcagatcaagcatgtggtggtggcgaccatgggcgatatgctgggcggcttgaaaggc
cttctcgtcaattttgtagtgcggcacgtcaaaaaaatggtgccggctttttcgttgccg
caggcagtttcattcaaggatgtattggcgcaagccgctcacatgcacttgcagaggccg
cttctgggaccgcaggacatcgcgtttctgcagtataccggcggcactaccggcaccgcc
aagggggcgatgctcacgcatcgcaatatcgtcgccaatattctgcagaatgaagcctgg
atctggccggtattgcgcaaggagccgccggacaagacgctgaattttgtctgcgcgctg
ccgctttatcatatcttcgcgttgacggcctgctgcatgctgggtacccggctgggcgtg
atgaatatcctgatcccgaatccgcgcgatattcccagtctcgtcaaggagctgatgaag
tacaagatcaacctgttgcctgcagtgaatacgctgtacaacggcttgctgaataatccc
gattttgcaaaagtcgatttttccgagctcaaactgtgtaacggcggtggcatggccgta
cagcaggttgtcaatgatcgttggcgagtagttaccggatgctcgatcattgaaggttac
ggcttgtccgaaacctcgccggtagcgacttcgaacccggttgaaacgacagaattttcc
ggcacgataggcttgccggtaccgtcgactgaagtgatgatccttgacagcaatgacaat
gaagttgcactcggcttgtccggcgagattgcgatacgcggcccgcaggtaatggcaggt
tactggaacaatcctgctgaaacggcacaggcgatgacggctgacggatttttcaagacc
ggcgatatcggcgtcatggatgcgcgcggttacacgaggattgtcgatcgcaagaaagac
atgattctggtgtccggtttcaatgtctatccgagtgaaattgaaaacgtggtcgccgga
catccaggcgtgctggaatgcgcctgcataggcgtgccggatgagcatacaggtgaagcg
gtcaaactgtttgtcgtgcgccgcgaccctgcattgactgcagaagccctgatggccttc
tgcaaggaacaatttaccggttacaagaagccgaaaatgatagagttccgaacggagttg
ccgaaatcgaatgtcggcaagatactgcggcgcgaattgcgcgatgaaatcaagacgact
tga
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