Herminiimonas arsenicoxydans: HEAR0265
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Entry
HEAR0265 CDS
T00490
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
har
Herminiimonas arsenicoxydans
Pathway
har03420
Nucleotide excision repair
har03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
har00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HEAR0265 (uvrD)
03430 Mismatch repair
HEAR0265 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
har03400
]
HEAR0265 (uvrD)
Enzymes [BR:
har01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HEAR0265 (uvrD)
DNA repair and recombination proteins [BR:
har03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HEAR0265 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HEAR0265 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
Acyl-CoA_dh_M
Motif
Other DBs
NCBI-ProteinID:
CAL60493
UniProt:
A4G1V6
LinkDB
All DBs
Position
258444..260732
Genome browser
AA seq
762 aa
AA seq
DB search
MQNLLHNLNPEQLAAVTLPAQPALILAGAGSGKTRVLTTRIAWLIQTGQVSPAGILAVTF
TNKAAKEMMTRLSAMMPINTRGMWIGTFHGLCNRLLRAHYRDAALPQTFQILDSQDQLSM
IKRLLKANNIDDEKYPPRNLMYFINGAKDNGLRAQDVEAHDDYNRKMVELYEIYDQQCQR
EGVVDFAELLLRTYELLSRNQPLREHYQSRFKHILVDEFQDTNNLQYNWLKLMAGTQGAV
FAVGDDDQSIYAFRGANVGNMSAFEREFKVENLIKLEQNYRSHGHILDTANTLIANNTKR
LGKNLHTDAGHGEQVRIFESTSDLQEAQWIIEETKSLIAEGGTRSEIAVLYRSNAQSRVI
EHALFSAGIPYRVYGGQRFFERAEVKHAIAYLQLMDNLHNDSAFLRVVNFPTRGIGARSL
EQLQDAARQYGISLYAAVPYISGKAGTSLGAFVKLIEGARFETQHLPLPEMVQVVLDASG
LITHYQKEKEGADRIENLEQLVSAATLFVSEEGFGHDAPALMGPTSKQMAGPAITTQDGI
EVLDADAPLPAVMSPLSAFLSHASLEAGDNQAQAGQDALQLMTVHSAKGLEFDAVFITGL
EEGLFPHENSQKEEGGVEEERRLMYVAITRAKRRLYISFSQTRMLHGQMRYNMKSRFFDE
MPEDSLKWLSPKVHPPAHQWYAHPKAAWEDALGAGSNRIAQNIVKSDIGWRIGESVAHAK
FGEGVIVNIEGSGGSARAHINFGRHGMKLLDLSIAKLDKLAG
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcttcttcacaatctcaatcccgaacaactcgccgctgttaccttacccgct
caacccgctctgattctggccggtgccggatcgggcaagacgcgtgtgctgacgacgcgc
atcgcatggctgattcagaccgggcaggtatcgcctgccggcatcctcgcggtgaccttt
accaacaaggcggcgaaggaaatgatgacgcgcctgtcggcgatgatgccgatcaacacg
cgcggcatgtggatagggacgtttcacggcttgtgcaatcgcctgttgcgcgcgcattac
cgcgatgcggctttgccgcagacgttccagattctggactcgcaggatcagctgtcgatg
atcaagcgtttgctgaaggcgaacaatatcgacgatgaaaaatatccgccgcgcaatctg
atgtacttcatcaatggcgccaaggataacggcttgcgtgcgcaggatgtcgaagcgcat
gacgattacaaccgcaagatggtcgagttgtatgagatctacgatcagcaatgccagcgc
gaaggcgtggtcgattttgccgaactgttgttgcgcacctatgaattgctgagccggaat
cagcccttgcgcgaacattatcagtcgcgcttcaagcatattctggtcgatgaatttcag
gatacgaataacctgcaatacaactggctcaagttgatggccggcacgcaaggcgcagtg
tttgccgtcggtgacgacgatcaaagcatctatgctttccgcggtgcgaacgtgggcaac
atgagtgccttcgagcgcgagttcaaggtggaaaatctgatcaagctggagcagaactat
cgctcgcacggtcatatactcgataccgccaatacgctgattgccaacaataccaagcgc
ctgggcaagaatctgcataccgatgccgggcatggcgaacaggtaaggatttttgaatcc
accagcgatctgcaagaggcccaatggatcatcgaagaaacgaaaagcctgattgcagaa
ggcggcacgcgtagcgaaattgccgtgctgtaccgctcgaatgcgcaatcgcgcgtgatc
gagcatgcattgttctcggccggcatcccgtatcgcgtctatggcgggcagcgctttttc
gagcgcgccgaagtcaagcatgcgatcgcgtatctgcagctgatggacaatctgcataac
gactctgcttttttgcgcgtagtgaattttccgacacgcggcataggcgcacgttcgctg
gagcaattgcaggatgcggccagacagtatggcatttcactgtatgccgccgtgccgtat
atctcgggcaaggcgggcacttcgctcggcgccttcgtcaaattgatagagggtgcacgt
tttgaaacgcagcatctacccttgccggaaatggtgcaggtggtgctcgatgccagcggc
ttgatcacgcattatcagaaggaaaaagagggtgccgaccggatagaaaatctggagcag
ctggtcagcgcggcaaccttgtttgtttcggaagaaggcttcggtcacgatgcgcccgca
ttgatggggccgaccagcaaacagatggccggtccggccattaccacgcaggacggcatt
gaagtactggatgcggatgcgcccttgccggcggtgatgtcgcccttgtcggccttcctc
tcgcatgcgtcgctggaagcgggtgacaaccaggcgcaggccgggcaggatgcattgcaa
ttgatgaccgtgcattcggccaaggggctggaattcgatgcggtgttcatcaccggtctt
gaagaaggtttgttcccgcacgaaaattcgcagaaggaagagggcggagtcgaggaagaa
cggcgtttgatgtatgtggccatcacgcgtgccaagcgcaggctgtacatcagtttttca
caaacgcgcatgctgcacgggcagatgcgttacaacatgaaatcgcgcttcttcgatgaa
atgccggaagattcattgaaatggctgtcgcccaaagtgcatccgccggcgcatcaatgg
tatgcgcaccccaaggcagcgtgggaagacgcgctcggtgcaggttccaacaggattgcg
caaaacatcgtcaagagcgatatcggctggcgcataggcgagtcggttgcgcatgccaag
tttggcgaaggagtgatcgtcaatatagaaggcagcggcggcagtgcccgtgcgcatatc
aacttcggacggcacggaatgaaattgctggatttgagtatcgccaagcttgataaatta
gctggctaa
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