Herminiimonas arsenicoxydans: HEAR0269
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Entry
HEAR0269 CDS
T00490
Symbol
polA
Name
(GenBank) DNA polymerase I (POL I)
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
har
Herminiimonas arsenicoxydans
Pathway
har03030
DNA replication
har03410
Base excision repair
har03420
Nucleotide excision repair
har03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
har00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HEAR0269 (polA)
03410 Base excision repair
HEAR0269 (polA)
03420 Nucleotide excision repair
HEAR0269 (polA)
03440 Homologous recombination
HEAR0269 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
har03032
]
HEAR0269 (polA)
03400 DNA repair and recombination proteins [BR:
har03400
]
HEAR0269 (polA)
Enzymes [BR:
har01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HEAR0269 (polA)
DNA replication proteins [BR:
har03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HEAR0269 (polA)
DNA repair and recombination proteins [BR:
har03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HEAR0269 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HEAR0269 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
CAL60497
UniProt:
A4G1W0
LinkDB
All DBs
Position
263340..266093
Genome browser
AA seq
917 aa
AA seq
DB search
MNYRIPMNKTLLLVDGSSYLYRAFHAMPDLRGPEGAPTGAIYGMINMLRRLRKDYPDAEY
MACVFDAKGKTFRDDLYAEYKAQRASMPDDLVRQIEPIHEAVRAMGWPILMVDGIEADDV
IATLAVAAVGHGINTVISTGDKDLAQLVNEHVTLVNTMSGEILDRDGVLAKFGVPPERIV
DYLTLVGDTVDNVPGVEKVGPKTAVKWLTQYGTLDGIVAHAAEIKGVVGENLRRALDWLP
QAKVLITVKTDCDLSAHMTEIPESLTQKTEDIEAMVAFFKRNGFKSWLRELTEKTEMPAS
ATAPQGALFGEDTPEVEKHYETVWTEANLDRWLQKINAAELTAIDTETTSLEPMQAQLVG
ISLCCEPGVAAYIPVAHRYQDVPLQLSRASVLEKLRSWLEDDSKPKVGQNLKYDSHIFAN
HGVTLRGIVHDTLLQSYVFESHRSHDMDSLALRHLNRKTMTFQDVCGKGASQLCFDQVDI
ARATEYAAEDADITLQLHQRMFPHVAEDAGLSFVYEKIELPTAVVLQKVERNGVLIDPGL
LATQSHELGKRMLEIEQQAYELAGQPFNLGSPKQIGEIFFEKMKLPVVKKTPSGSPSTDE
EVLQKLAEDYPLPKLLLEYRGLSKLKSTYTDKLPKMIDPATGRVHTNYAQAVAVTGRLSS
NDPNLQNIPIRNAEGRRIREAFIAPPGSVIVSADYSQIELRIMAHISEDENMLRAFAEGE
DIHRATAAEIFGVARGDVSSEQRRYAKVINFGLIYGMSAFGLAGNLGIERAAAQSYIEKY
FYRFSGVKRYMDDTRLEAKARGYVQTVFGRRLWLPEINSPNGPRRQGAERAAINAPMQGT
AADLIKLAMIAVQDWLEAEKLQTKMIMQVHDELVLEVPETELALVRVKLPELMRNVAQLK
VPLIAEVGVGKNWDEAH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
ttgaactaccgaatccctatgaataaaaccctgttgttagtcgatggttccagctatttg
tatcgcgccttccatgcgatgccggatttgcggggtcccgaaggggcgccaaccggcgcc
atctacggcatgatcaatatgctgcgccgtctgcgcaaggattatccggatgccgaatat
atggcgtgcgtattcgatgccaagggcaagacttttcgcgacgacctgtacgccgaatac
aaggcgcagcgcgcctcgatgccggatgatctggtgcggcagatcgagccgatacacgaa
gccgtgcgcgcgatgggctggcccatcctgatggtggacggtatcgaggccgatgatgtg
attgccacgctggcagtggcggcggtcgggcacggcataaacacggtgatctcgaccggc
gacaaggacctggcgcaactcgtcaatgagcatgtgacgctggtcaatacgatgagcggt
gaaatactcgatcgtgacggcgtgctggccaaattcggcgtgccgccggaacgcatcgtc
gattacctgaccctggtaggcgataccgtcgataacgtgcccggtgtggaaaaagtcggg
ccgaaaacggcggtcaaatggctgacgcaatacggcacgctggacggcatcgtcgcacac
gcggcggaaatcaagggcgtggtgggtgaaaatctgcggcgcgcgctggattggctgccg
caagccaaggtcttgatcactgtcaagaccgattgcgacctgtctgcgcatatgacggaa
attccggaatccctgacgcaaaaaacggaagacatcgaagccatggtcgccttcttcaag
cgcaatggtttcaagagctggctgcgcgagttgacggaaaaaaccgaaatgccggcaagc
gcaacggcgccgcaaggcgcactgttcggcgaagatacgcctgaagtggagaaacactac
gaaacggtatggacggaagccaacctggatcgctggctgcagaaaatcaatgctgcggaa
ctgacggccatcgataccgaaacgacatctctggagcctatgcaggcgcaactggtgggc
atttcattgtgttgcgagccgggtgtcgccgcatacatcccggtggcgcatcgctatcag
gatgtgccgctgcaattgtcgcgcgcatcagtgctggaaaagttgcgctcctggctggaa
gatgacagcaaaccgaaagtcgggcaaaacctcaaatacgacagccatattttcgccaat
cacggcgtgactttgcgcggcatcgtgcatgacaccttgctgcagtcgtatgtatttgaa
tcgcaccgcagtcacgacatggacagtctcgcgctgcgtcacttgaatcgcaagacgatg
acgttccaggacgtgtgcggcaagggtgcatcgcagctgtgtttcgatcaggtagacatt
gcgcgtgcaaccgagtacgcggctgaagatgcggacattacgctgcaactgcatcagcgc
atgtttccgcatgtggcggaagatgcaggcctgagtttcgtttatgaaaaaatagaattg
ccgacggcagtcgtgttgcagaaggtggagcgcaatggcgtactgatcgatccgggtttg
ctcgccacgcaatcgcatgaactcggcaagcgcatgctggagatcgagcagcaggcatat
gaactggcaggccagcctttcaatctgggttcgcccaaacagataggcgaaattttcttt
gagaagatgaagctgccggtcgtcaagaaaacaccatccggctccccctccaccgatgag
gaagtgctgcaaaagctggcggaagattaccccttgcccaagctcttgctggagtatcgc
ggcctgtcgaaactgaaatcgacttataccgacaagctgccgaaaatgatcgatccggct
accggccgcgtgcatacgaattatgcgcaggcggtggcagtgaccggacgcttgtcatcg
aacgatcccaacctgcaaaacatccctatccgtaatgcggaagggcgccgcatacgcgaa
gcatttatcgcaccgcccggcagcgtgatcgtatctgccgattattcgcaaatcgaattg
cgcatcatggcgcacatctcggaagatgaaaacatgttgcgcgcgtttgccgaaggcgaa
gatattcatcgcgcgactgccgccgaaattttcggcgtcgcacgcggcgatgtcagcagc
gagcagcgccgctatgcaaaggtgatcaatttcggcctgatctatggcatgagtgcattc
gggctggccggcaatctcggcatcgaacgtgcggcggcgcaaagctatatcgaaaaatat
ttttatcgcttttccggcgtcaagcgttacatggatgacacgcggctggaagcaaaagcg
cgcggttatgtgcagacggtattcggccgtcgtttgtggctgccggaaatcaattcgccc
aatggtcctcgtcgccagggtgccgaacgcgctgcgatcaacgcgcccatgcaaggcacg
gcagccgatttgatcaagctggcaatgatcgccgtgcaggattggctggaggcagaaaaa
ctgcagaccaaaatgatcatgcaggtgcacgatgaactggtgctcgaagtgccggaaaca
gagttggcgctggtgcgtgtaaaactgccggagttgatgcgcaatgttgcgcaactgaaa
gtgcctttgattgccgaggtgggtgtcggaaaaaattgggatgaagcacattga
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