Herminiimonas arsenicoxydans: HEAR0326
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Entry
HEAR0326 CDS
T00490
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
har
Herminiimonas arsenicoxydans
Pathway
har04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
har00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
HEAR0326 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
har03016
]
HEAR0326 (trmU)
Enzymes [BR:
har01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
HEAR0326 (trmU)
Transfer RNA biogenesis [BR:
har03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
HEAR0326 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
QueC
ThiI
Arginosuc_synth
Asn_synthase
DUF7411
Motif
Other DBs
NCBI-ProteinID:
CAL60550
UniProt:
A4G213
LinkDB
All DBs
Position
complement(315717..316835)
Genome browser
AA seq
372 aa
AA seq
DB search
MAKKRVVIGMSGGVDSSVSAWLLKEQGYEVIGLFMKNWEDDDDSEYCSTRQDWIDAASVA
DVVGVDIEAVNFAAEYKDRVFAEFLREYEAGRTPNPDVLCNAEIKFKAFLDHAMLLGADM
IATGHYARVREVTSGPDAGQVQLLKAVDASKDQSYFLHRLNQAQLSKTLFPLGEIRKTEV
RKIAEQLQLPNASKKDSTGICFIGERPFREFLNRYLSYQPGPMKTPDGTIVGEHVGLSFY
TLGQRKGIGLGGMKTHKNTDGNSGPWYVARKDVANNTLYIVQGHDHPWLLSSALSAGQMS
WVAGRAPSEELVAAKTRYRQADVACSQHATADNLALAFDTPQWAVTPGQSAVLYQGDVCL
GGGIITASTLTE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaagcgtgtcgtcatcggcatgtccggtggcgtcgattcgtcggtctccgcc
tggctcttgaaagaacagggttatgaagtcatcggtctgttcatgaagaactgggaagat
gacgacgactccgaatactgctcgacccgtcaggactggattgatgcagccagcgtcgcc
gacgtcgtcggcgtcgatatcgaagccgtcaatttcgccgcagaatacaaggatcgtgtg
ttcgccgaattcctgcgcgaatacgaagccggccgcacccccaatcctgatgtactgtgc
aacgctgaaatcaagttcaaggccttcctcgatcacgccatgctgctcggtgccgacatg
atcgcgaccggccactatgcgcgcgtgcgcgaagtgacgtcagggccggatgcaggccag
gtccagttattgaaagcagtcgatgccagcaaggatcaaagctacttcctacaccgcctg
aaccaggctcaattgtcgaagaccttgttccctctcggcgaaattcgcaaaacggaagtg
cgcaaaatcgccgaacagctgcaactgccaaacgcgagcaaaaaagattccaccggcatc
tgcttcatcggcgaacgtccattccgcgaatttctgaatcgctacctgtcttatcaaccg
ggtccgatgaaaacgccggacggcacgatcgtcggcgaacacgtgggcctgagtttttac
acactggggcagcgcaagggcataggcctgggcggcatgaagacgcacaagaatacagat
ggcaatagcggcccctggtacgtcgcacgcaaggacgtcgcaaacaacacgctgtatata
gtgcaaggtcacgatcatccctggctgctgtcgtctgcattaagtgcaggccaaatgagc
tgggtcgccggcagggcgccgagcgaagaactggtagccgccaagacacgttatcggcaa
gccgatgtcgcatgctcgcagcacgcaacagctgacaaccttgcactcgcctttgacacg
ccgcaatgggctgtcacgcccggacaatccgccgttttatatcaaggcgatgtatgcctg
ggtggcggcatcattaccgcgtcaacgctcactgaataa
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