Herminiimonas arsenicoxydans: HEAR0580
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Entry
HEAR0580 CDS
T00490
Name
(GenBank) putative DNA-polymerase/ribonuclease/exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
har
Herminiimonas arsenicoxydans
Pathway
har03030
DNA replication
har03430
Mismatch repair
har03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
har00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HEAR0580
03430 Mismatch repair
HEAR0580
03440 Homologous recombination
HEAR0580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
har03032
]
HEAR0580
03400 DNA repair and recombination proteins [BR:
har03400
]
HEAR0580
Enzymes [BR:
har01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HEAR0580
DNA replication proteins [BR:
har03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HEAR0580
DNA repair and recombination proteins [BR:
har03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HEAR0580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CAL60781
UniProt:
A4G2P4
LinkDB
All DBs
Position
complement(583443..584024)
Genome browser
AA seq
193 aa
AA seq
DB search
MTFHEKLIFIDLETTGANLINDRITEIGIVTVNADGDIDRWSSFVNPGRPIPSFIQDLTG
ISDRMVATAPTFETLADTVRERLEDGLFIAHNARFDYGFLHHALARAGHALSIDVLCTVK
LSRRFFPEEKRHNLDTLIARHGLVPEARHRALADADLLWQLWEKLTASMPSEIFSQAVQT
LRQRPALPSATDA
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgacatttcatgaaaaattgatatttatcgatctcgaaacgacaggtgcaaacctaatc
aacgatcgcatcacggagatcggcatcgtgaccgtgaatgccgatggcgacattgaccgc
tggtcgagctttgtcaatccaggccggccgataccgtcttttatccaggatctgaccggc
atcagcgaccgaatggtcgcgacagcaccgacgtttgaaaccctggcggatacggtgcgc
gaacggctggaagatggcttgttcatcgcgcataatgcgcgcttcgattacggctttctg
catcacgcgctcgcccgtgcaggacacgccttgtctatcgatgtgctgtgtaccgtcaaa
ctgtcacgcagatttttccccgaagaaaaaaggcacaatctggatacgctgattgcacgc
cacggtctggttccagaagcgcgccaccgggcattggcggatgcggatttgttatggcaa
ttgtgggagaaactgactgccagcatgccgtccgagatttttagtcaggcagtccagact
ttgcgtcagcggcctgccctaccgtcagcaacggatgcgtag
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