Herminiimonas arsenicoxydans: HEAR0708
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Entry
HEAR0708 CDS
T00490
Name
(GenBank) putative ATP-dependent exoDNAse (exonuclease V) beta subunit RecB
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
har
Herminiimonas arsenicoxydans
Brite
KEGG Orthology (KO) [BR:
har00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
har03400
]
HEAR0708
Enzymes [BR:
har01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HEAR0708
DNA repair and recombination proteins [BR:
har03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HEAR0708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_22
AAA_30
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
CAL60902
UniProt:
A4G315
LinkDB
All DBs
Position
709781..713071
Genome browser
AA seq
1096 aa
AA seq
DB search
MSDLHINTSAPRAYEINGVQADAERFVAIACDPARSVVVEACAGSGKTWLLVARVLRLLL
AGTEPAAILAITFTRKAAQEMRERLMQLLHELTLKPEADVLTLLRERGVADHELLALLPL
ARGLYERVLRSPQALSIDTFHSWFARLVQIAPLASGVPHGYALTESTGELSSDAYSRFMQ
TVNEADNQEVKDALIALYAQVGDSNARNLLDAFAGKRAEWWASVQNGEPLEWLTELCGED
AEVDARLALWSDEKTVARIGQIAWLLGQGSAVNQERATAIEKALSSGAALENFAALTNEF
FDANGKFRKNRTTKDLTKALLGNLGDEGVYAFEVEFEAVGEALKTILRRSMEPAVIALNR
ALFTVGAAYLETYQAVKAEQRVFDFADLEWQAYRLLTNEEHAAYLQSRLDARYRHVLLDE
FQDTNPLQWSIVQAWLNAYGDDADKPSMFVVGDPKQSIYRFRRAEPRVFSAAKETLVAQG
ADFLRTNQTRRNAAGIVDVLNASFVANPIYQPQTTLEQSPGAVWQLPLVQQDKQEKVVWS
PVQLRDPLTTPREEEEDARRLEEGRAVALAILQARKELKSERWSDVMLLVKKRTHLRAYE
RALREAGIPFASDKRGGLLESLEVADLIALLNFLITPHDNLALAHVLKSPIMAAGDDELI
ALAERREKTWWLRLQAEVTELSSPALLRAAGLLEKWLHLAPRLPVHDLLDRILHEGDVVA
RYAQTASPLVRGQVLGNIEAFTELALNLDAGRYPSLPKFIDALRRLQKSADSDAPDEADI
DAALDAVRILTIHGAKGLEAPIVVLLDANHSDGARDDVGVLCAWPQDRDAPTHFSVFGRQ
AERGAARDTLFAEEEQLKQQEDWNLLYVATTRAKNLLIVSGVADNRSTTVNGVADGRWYA
RFQGAQPVQPDAQAAAAAATGETEFFLPIFNPPALPAPQIEPTAIFSSAEIDEGIALHAL
MELLTPPQAWPITMHAPALIAKWLACTHEMAETISGQASVILAQPELARFFDPAQHRFAR
NEMEVVSSAGVARFDRAVMFDDELWILDYKRNLLESERAAYAAQLERYRVAAQQVFPDVR
IRSGLITVDGRLTELA
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacctgcacatcaatacgtctgcgccgcgcgcctatgaaattaacggagtacag
gccgacgcagaacgtttcgtcgccattgcctgcgatcctgcgcgttcggtggtggtggaa
gcctgcgccggcagcggcaagacctggctgctggtggcgcgcgtgttgcgcctgctgctg
gccggtaccgagccggcagcgatactggcgattacgtttacgcgcaaggcggcgcaggaa
atgcgcgagcgcctgatgcaattgctgcatgagctgacgctgaagccggaagcggatgtg
ctgacgctgctgcgcgaacgcggcgttgcagatcacgaactgctggcgctgctgccgctg
gcgcgcggtttgtatgagcgtgtattgcgcagtccgcaagcgctctccatcgatactttt
cacagctggtttgcacggctggtccagattgcaccgctggcatccggcgtgccgcacggc
tatgcactgacggagtccaccggcgaattatcgtcggatgcctacagccgtttcatgcaa
acggtgaacgaggccgacaatcaggaggtgaaagatgcgctgattgccctgtacgcacaa
gtcggtgacagtaatgcgcgcaatctgctggatgcatttgcaggcaagcgcgccgaatgg
tgggcttcggtgcagaacggcgagccactcgagtggttgactgaattgtgcggtgaagat
gccgaagtagatgctcgacttgcactgtggtcggatgaaaaaacggtagcccgcatcggc
cagattgcatggctgctcggacagggtagtgcggttaatcaggagcgggcaacggcaata
gaaaaagccttatcgagcggtgccgcgctggaaaatttcgccgcgttgactaatgaattc
ttcgatgcgaatggcaagttccgtaaaaatcgcacgaccaaggatttgaccaaggctcta
ctaggcaatcttggtgacgagggtgtatacgccttcgaggtcgagttcgaggctgtgggc
gaagccctgaagacgatactccgccgcagcatggagccggcggtaattgcgctcaatcgc
gcattgtttacagtcggcgctgcctatctggaaacctatcaggcggtaaaggctgaacag
cgggtattcgatttcgccgatctggaatggcaggcctatcgtctgctgacgaatgaagaa
catgcggcctatctgcaaagccgtctcgatgcgcgctaccgccatgtattgctggatgaa
ttccaggataccaatccgctgcagtggagcatcgtgcaggcgtggctgaatgcctacggt
gacgatgctgacaagcccagcatgtttgtggttggcgatcccaagcaatcgatctatcgc
ttccgtcgcgccgagccacgcgtgttttccgccgcgaaggaaacgctggtggcgcaaggc
gccgacttcctgcgcaccaaccagacacggcgcaatgcggccggcatcgttgacgtcctg
aatgcaagctttgtcgccaatccgatttaccagccgcaaaccacgctggaacaatcgccg
ggcgcagtgtggcaactgcccttggtgcagcaggacaagcaggaaaaagtcgtctggtcg
ccggtgcagttgcgcgacccgctgaccacgccgcgcgaggaagaagaggatgcacgccgg
ctggaagaaggccgtgccgtggcgctggccatcctgcaggcgcggaaggaactcaagagc
gaacgttggtcggacgtgatgctgctggtcaagaagcgtacgcatttgcgcgcctatgag
cgcgccttgcgcgaagccggaattccgtttgcctccgacaagcgcggcggtttgctggag
tcgctggaagtggctgatctgatcgccttgctgaatttcctcattacgccgcacgataat
ctggcgctggcacatgtattgaaatcgccgatcatggcggccggcgacgatgagctgatc
gcgctggcagagcgccgcgaaaaaacatggtggctgcgcttgcaggcagaggtgacagag
ttgtcgtcgccggccttgctgcgcgctgccggcctgctggaaaagtggctgcacctggcg
ccacgcttgccggtgcatgatttgctcgatcgcattctgcatgagggcgatgtcgtcgcg
cgttacgcgcagacggcatcgccgctggtgcgcggccaggtgctgggcaatatcgaagcg
tttaccgaacttgccttgaatctggatgccgggcgttatcctagcctgccgaaattcatc
gatgccttgcgccgcttgcaaaaatccgccgacagcgatgcaccggatgaagccgatatc
gatgccgcgctggatgcggtgcgcatattgacgatacatggcgccaagggactggaagcg
cccatcgtcgtgttgctggacgcgaatcacagcgatggcgcgcgcgacgatgtcggcgtg
ttgtgcgcatggccgcaggatcgcgatgcacctacgcatttttccgtcttcggccgccag
gccgaacgcggcgcggcgcgcgatacgctgtttgccgaggaggaacagttgaagcagcag
gaagactggaacctgctgtacgtcgcgaccacgcgtgcaaaaaatctgctgatcgtcagc
ggtgtagccgataaccgcagtaccacggtgaacggcgtggcagacggccgctggtatgcg
cgcttccagggtgcgcagcctgtgcagccggatgcgcaggctgcggcagcggccgctacc
ggcgaaactgaattcttcttgcctatattcaatccgcctgccttgccggcgcctcagatt
gagccgacggcgattttttccagtgcggaaattgacgaaggcatcgccttgcatgctttg
atggagctgttgacgccaccgcaagcctggcctattaccatgcatgcgccggcactgatc
gcgaaatggctggcgtgtacgcatgaaatggcggaaacaataagtgggcaggccagtgtg
attctggcgcagcctgagctggcgcggtttttcgatccggcgcagcatcgctttgcacgc
aacgaaatggaagtcgtcagcagcgccggcgttgcgcgtttcgatcgcgccgtcatgttc
gacgatgaattgtggatactcgattacaagcgcaatctgctggaaagcgaacgtgcagcg
tacgccgcgcaactcgagcgttaccgtgtagcggcgcaacaggtattccccgatgtgcgt
atccgcagcggattgattacggtagacggacgtttgacggaactggcgtaa
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