Herminiimonas arsenicoxydans: HEAR0748
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Entry
HEAR0748 CDS
T00490
Symbol
lpdA
Name
(GenBank) Dihydrolipoyl dehydrogenase (E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes) (Dihydrolipoamide dehydrogenase) (Glycine cleavage system L protein)
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
har
Herminiimonas arsenicoxydans
Pathway
har00010
Glycolysis / Gluconeogenesis
har00020
Citrate cycle (TCA cycle)
har00260
Glycine, serine and threonine metabolism
har00280
Valine, leucine and isoleucine degradation
har00310
Lysine degradation
har00380
Tryptophan metabolism
har00620
Pyruvate metabolism
har00630
Glyoxylate and dicarboxylate metabolism
har00640
Propanoate metabolism
har00670
One carbon pool by folate
har00785
Lipoic acid metabolism
har01100
Metabolic pathways
har01110
Biosynthesis of secondary metabolites
har01120
Microbial metabolism in diverse environments
har01200
Carbon metabolism
har01210
2-Oxocarboxylic acid metabolism
har01240
Biosynthesis of cofactors
Module
har_M00009
Citrate cycle (TCA cycle, Krebs cycle)
har_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
har_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
har00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
HEAR0748 (lpdA)
00020 Citrate cycle (TCA cycle)
HEAR0748 (lpdA)
00620 Pyruvate metabolism
HEAR0748 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
HEAR0748 (lpdA)
00640 Propanoate metabolism
HEAR0748 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HEAR0748 (lpdA)
00280 Valine, leucine and isoleucine degradation
HEAR0748 (lpdA)
00310 Lysine degradation
HEAR0748 (lpdA)
00380 Tryptophan metabolism
HEAR0748 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
HEAR0748 (lpdA)
00670 One carbon pool by folate
HEAR0748 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
har04147
]
HEAR0748 (lpdA)
Enzymes [BR:
har01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
HEAR0748 (lpdA)
Exosome [BR:
har04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
HEAR0748 (lpdA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
Pyr_redox_3
FAD_oxidored
GIDA
Biotin_lipoyl_2
NAD_binding_8
Thi4
FAD_binding_3
AlaDh_PNT_C
GCV_H
3HCDH_N
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
CAL60942
UniProt:
A4G355
LinkDB
All DBs
Position
756612..758447
Genome browser
AA seq
611 aa
AA seq
DB search
MSTIEVKVPDIGDFKEVEIIEMLVNVGDTIKVDQSLITVESDKASMEIPSSHAGVVKELK
VKLGDKVAEGSLLLILEASESAAAPAAAPAAPAPAAVAPTPEPAAAPAAASVKAAAPVSA
PAAAPVNAPAAASFAGKADIECDMMVLGAGPGGYSAAFRSADLGMATVLIERYSTLGGVC
LNVGCIPSKALLHVAAVIDEAAAMTAHGVTFGKPQIDIDQLRGYKEKVIGKMTTGLSGMA
KARKVNVVQGVGQFVGTNHIEVTAADGSKKTIQFKQAIIAAGSSVVNLPFIPEDPRIIDS
TGALELRSVPKRMLVIGGGIIGLEMATVYSTLGARIDVVEMLDGLMQGADRDMVKVWQKF
NEKRFDKIMLKTKTVAVEALKEGIKVSFEAAEAGVTAPEPQVYDMVLVAVGRSPNGKKIA
ADKAGVAVTDRGFIEVDAQMRTNVHHIFAIGDLVGQPMLAHKAVHEAHVAAEAAAGEKSY
FDARVIPSVAYTDPEVAWVGITEDEAKAKGIKLEKGHFPWAASGRAVANGRDEGFTKLLF
DAETKRIVGGGIVGTHAGDMIGEIALAIEMGADAVDIGKTIHPHPTLGESIGMAAEVYKG
VCTDLPPMKKK
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgatagaagtcaaagtccccgatatcggcgatttcaaggaagtggaaatcatc
gaaatgctggtcaatgtgggcgatacgatcaaggtcgatcaatcgctgattacggttgaa
tccgacaaggccagcatggagattccatccagccacgccggtgtcgtcaaagagttgaag
gtcaagctcggtgacaaggttgcggaaggttcgctgctattaattttggaagcgtcggaa
agtgcagcagctcctgcggccgcaccggctgcgccagcgcctgctgcagtcgctccaact
ccggaacctgccgcagcgccagccgccgcttctgtaaaagctgctgcgcctgtttcagct
ccagccgccgcaccagtgaatgcaccggccgccgccagcttcgcaggcaaagccgatatc
gaatgcgacatgatggtgctcggcgcaggtcctggcggttactccgctgcgttccgctcg
gccgatctcggcatggcgactgttttgatcgagcgctactcaacactcggcggcgtctgt
ctgaacgtcggttgcatcccatcgaaagcattgctgcacgttgctgcagtgatcgatgaa
gcggcagcgatgacggcacatggcgtcaccttcggcaaaccgcaaatcgatatcgaccag
ctgcgcggctacaaggaaaaagtcatcggcaagatgaccaccggtttgtccggcatggcc
aaggcacgcaaggtcaatgtagtgcagggcgtcggccagtttgtcggcaccaaccacatt
gaagtcactgcagccgacggcagcaaaaagactatccagttcaagcaagccatcatcgcc
gccggttcgtcggtcgtgaatctgccattcattcctgaagatccgcgcattattgattcc
accggcgcactcgaattgcgcagcgtacccaagcgcatgctggtcatcggcggcggtatc
atcggtctggaaatggcaaccgtctattcaacgctcggtgctcgcatcgacgtggtggaa
atgctggacggcctgatgcagggcgcagatcgcgacatggtcaaggtctggcaaaaattc
aacgagaagcgcttcgacaagatcatgttgaagaccaagaccgttgccgtcgaagcattg
aaagaaggcatcaaggtgtctttcgaagcggcagaagccggcgtcactgcgccggagccg
caagtctacgacatggtattggtcgcagtaggacgcagtccgaacggcaagaagattgct
gccgacaaggctggcgttgcggtcaccgatcgtggcttcatcgaagtcgatgcgcaaatg
cgcaccaacgtgcaccatatcttcgccatcggcgatctggtcggccagccgatgctggct
cacaaagccgtgcatgaagcgcacgttgcagccgaagccgcagcaggcgagaagtcctac
ttcgacgcccgcgtgattccatccgttgcctacaccgatcctgaagtggcatgggtcggc
atcaccgaagacgaagccaaggccaaaggtatcaagctcgaaaaaggccacttcccatgg
gcagcatcaggccgcgcagtagccaacggtcgcgatgaaggctttaccaaattgctgttc
gatgcagaaaccaagcgcattgtcggcggcggtatcgtcggcacgcacgcgggcgacatg
atcggtgaaatcgcattggcgatcgagatgggtgctgatgctgttgatatcggcaagacc
atacatccgcatccaaccttgggtgagtcgataggaatggcggcggaagtgtacaagggt
gtgtgcactgatttgccgccgatgaagaaaaagtaa
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