Herminiimonas arsenicoxydans: HEAR1045
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Entry
HEAR1045 CDS
T00490
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau [Contains: DNA polymerase III subunit gamma]
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
har
Herminiimonas arsenicoxydans
Pathway
har03030
DNA replication
har03430
Mismatch repair
har03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
har00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HEAR1045 (dnaX)
03430 Mismatch repair
HEAR1045 (dnaX)
03440 Homologous recombination
HEAR1045 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
har03032
]
HEAR1045 (dnaX)
03400 DNA repair and recombination proteins [BR:
har03400
]
HEAR1045 (dnaX)
Enzymes [BR:
har01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HEAR1045 (dnaX)
DNA replication proteins [BR:
har03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HEAR1045 (dnaX)
DNA repair and recombination proteins [BR:
har03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HEAR1045 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_22
AAA_14
AAA_16
AAA_30
AAA_18
AAA_28
nSTAND3
DUF3646
Glyco_tranf_2_5
AAA_assoc_2
AAA_2
TsaE
AAA_24
Herpes_Helicase
Rad17
Motif
Other DBs
NCBI-ProteinID:
CAL61225
UniProt:
A4G3Y8
LinkDB
All DBs
Position
1059520..1061568
Genome browser
AA seq
682 aa
AA seq
DB search
MSYQVLARKYRPKSFDTLVGQEHVVRALTHALENKRLHHAYLFTGTRGVGKTTLSRILAK
SFNCIGPDGNGDITATPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP
SNARFKVYMIDEVHMLTNHAFNSMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL
KQMPPGHIVAHLDDILGQEQIEFETPALRLLAQGAHGSMRDALSLTDQAIAYAAGKVTLE
AVQGMLGALDQSFLIRLLDALAQKDGAGLLAVADEMATRSLSYNAALQDLGSLLHRIALA
QTVPAALPDDLPERDDVLRLAALFDAEEIQLFYQIAVHGRNELGLAPDEYAGFSMTLLRM
LAFRPGYGPAEAQAGAPAAAPAARPSAPVATAPAARLSAAPQAVTNSAPVARPAGMSPAM
AALQAARSGGKAARPAAVAPASAPTSASAPAANARATAPAQLPTAVPVRAPASVEKSDGI
DMPPAPPWDDEVPFGGSDANDAFSSSPAQKKTEVQSGPAVRPQAPAPAQSPAPTPASVPQ
AVSSRPFELHPVPSLNWDGNWPLLAASLPVRGVAQQLAQQSELLKCAPGADSSQIQFDLL
VAVDTLLAAGSVEKLTAALCEHFGQTVRVHTRVGAVEHTANAAAIADRAERQSEAEQSMR
EDPFVQKLMRDFGAEIVSVKPI
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcaagttctcgcccgtaaatatcgtccgaaaagcttcgacacactggtcggg
caggagcacgtcgtgcgagccttgacgcatgcgctggagaacaagcgcttgcatcacgcc
tacctgttcaccggtacgcgcggcgtcggcaagaccacgctatcgcgcattctggccaag
tccttcaattgcataggccccgacggtaacggcgatatcaccgcgacgccgtgcggcgtg
tgcgaagcctgcgtggcgatcgatgccggccgctttgtcgattacatcgaaatggatgcc
gcgtcgaatcgcggtgtcgatgaaatggcgcaattgctggagcaggcggtgtatgcaccg
tcgaatgcacgcttcaaggtctacatgatcgatgaggtgcacatgctcaccaatcatgcg
ttcaactcgatgctgaagacgctggaagagccgcccgagcacgtcaaattcatactcgcg
accaccgatccgcaaaaaattccggtcaccgttctttcgcgctgcctgcaattcaatctg
aaacaaatgccgcccggccatatcgttgcccatctggacgatatcctgggacaggaacaa
atcgaatttgaaacacccgcattgcgcttgctggcgcaaggtgcgcacggttcgatgcgc
gacgcgctgtcgctgaccgaccaggcgattgcctatgctgcgggcaaagtcacgctggaa
gcggtgcagggcatgctgggggcgctggaccaatcctttctgatacgcctgctggatgca
ctggcgcaaaaagatggcgcgggtttgctggcggttgcagatgaaatggcaactcgcagc
ctgtcgtacaacgcagccttgcaggatctgggttcactcctgcatcggatcgcgctggcg
caaacggtgcctgctgcgctgcctgacgatttgccggagcgcgacgatgtgttgcgcctg
gcagcactgttcgatgccgaagagatacagctgttttatcagatcgccgtgcatggccgc
aatgaactggggttggcgccggatgaatacgccggcttttcgatgaccttgctgcgcatg
ctggctttccgcccgggttacggtccggcagaagcgcaggcaggcgcgccggcagcagcg
ccggcggcccgaccatctgcacctgtcgcaacggcacctgctgcgcgcttgagcgccgcg
ccgcaggcagtaacgaatagcgcgcctgttgcacggcccgccggcatgagcccggcgatg
gcagccttgcaggcagcccgttccggtggcaaggcggcacgccccgcggctgttgcacct
gcttccgcacccacttccgcatccgcccctgcagcgaacgcacgtgcgactgcgcccgct
cagttgccaactgctgtacctgtgcgtgccccagcctcagtcgaaaaatccgacggcata
gatatgccgccggcaccgccgtgggacgatgaagtgccgttcggcggcagcgacgccaat
gatgctttttccagctcaccggctcaaaaaaaaactgaggtgcaatccgggccggcagtc
aggccgcaggcacctgcgccagcgcaatcgccggcaccgacaccagcatcagtaccgcaa
gctgtttcatcccgaccttttgagctgcatccggtgccatccctgaattgggacggcaac
tggccgctgcttgcggcatccttgccggtgcgcggcgtggcgcagcaattggcgcagcag
agcgaattgctcaaatgtgcgccgggggcagacagcagccagatccagtttgatttgctg
gtggcagtggacaccctgctggcggccggcagtgtagaaaaattgacggctgccttgtgc
gagcatttcggccagacggtgcgggtgcacaccagggttggcgcggtcgaacacacggcc
aacgccgccgccattgccgatcgggcagaacggcagagcgaagcagaacagtccatgcgg
gaagacccgttcgtacagaaactgatgcgcgattttggcgcagagattgtctcggtcaag
ccgatctga
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