Herminiimonas arsenicoxydans: HEAR1152
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Entry
HEAR1152 CDS
T00490
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6 dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
har
Herminiimonas arsenicoxydans
Pathway
har00521
Streptomycin biosynthesis
har00523
Polyketide sugar unit biosynthesis
har00525
Acarbose and validamycin biosynthesis
har00541
Biosynthesis of various nucleotide sugars
har01100
Metabolic pathways
har01110
Biosynthesis of secondary metabolites
har01250
Biosynthesis of nucleotide sugars
Module
har_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
har00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HEAR1152 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HEAR1152 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HEAR1152 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HEAR1152 (rfbB)
00525 Acarbose and validamycin biosynthesis
HEAR1152 (rfbB)
Enzymes [BR:
har01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HEAR1152 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
CAL61331
UniProt:
A4G494
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All DBs
Position
1171081..1172184
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AA seq
367 aa
AA seq
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MILVTGGAGFIGSNFVLDWLAQSDEPVVNVDKLTYAGNPNNLASLRDDTRHIFVHADICD
SDKMQELLSTYKPTAIVHFAAESHVDRSIHGPAEFVRTNINGTFSLLEAARTYWPQLTSA
EKEQFRFLHVSTDEVYGTLGPDDAPFSETTAYAPNSPYSASKAASDHLVRSYHHTYGLPT
LTTNCSNNYGPYHFPEKLIPLIIANALAGKPLPIYGDGQQIRDWLYVGDHCTAIRRVLQA
GKPGETYNIGGWNEKANLDVVNTLCDMLDALQPNGAGSSYRKQITYVADRPGHDRRYAID
ARKIERELGWKPAETFDSGIRKTVQWYLENQAWVRDVQSGDYMKWLEKNYQQRNAASELF
NKVQEKI
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgattttagtgacgggcggcgccggttttatcggttcgaattttgtgctcgactggctg
gcgcagagcgatgagccggtggtgaatgtcgacaagctgacctatgccggcaacccgaat
aatctggcctcgctgcgcgacgacacgcgacatatatttgtgcacgcggatatctgcgac
agcgacaaaatgcaggagttgttaagcacatacaagccgactgccatcgtgcattttgct
gcggaaagccatgtcgatcgttccatccatggcccggcagaattcgtacgcaccaatatc
aatggcaccttcagcctgctggaggcggcacgcacttactggccgcaactgacgagcgca
gagaaagaacaatttcgctttctgcacgtttccaccgatgaagtgtatggcacgctgggt
cctgacgatgcaccgttttccgagacgactgcgtatgcaccgaacagtccttattcggca
tcgaaagcggcgtccgatcatctggtgcgctcctaccaccacacctacggtttgccgaca
ctgaccacgaattgctcgaacaattacggcccttaccatttcccggaaaaactgataccc
ctgatcattgccaatgcgcttgctggaaaacctttgcctatttatggcgatgggcagcaa
attcgtgactggctgtatgtcggcgatcactgcaccgcgatacgtcgcgtgctgcaagcc
ggcaagcctggagaaacctacaatatcggcggctggaacgagaaagccaatctggatgta
gtgaacactctgtgcgatatgctggatgcattgcagccgaatggtgctggcagcagttac
cggaaacagattacttatgttgccgataggcccggccatgaccgtcgttatgcgattgat
gcgcgcaagatcgaacgtgaactcggctggaaacctgccgagaccttcgacagcggtatc
aggaaaaccgtgcagtggtatctggagaatcaggcatgggtgcgcgatgtgcagtccggt
gattacatgaagtggctggagaaaaattatcagcaacgcaatgccgctagtgagctattc
aacaaagtacaagaaaaaatttag
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