Herminiimonas arsenicoxydans: HEAR1840
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Entry
HEAR1840 CDS
T00490
Symbol
vsr
Name
(GenBank) Very short patch repair protein (DNA mismatch endonuclease) (Vsr mismatch endonuclease)
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
har
Herminiimonas arsenicoxydans
Brite
KEGG Orthology (KO) [BR:
har00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
har03400
]
HEAR1840 (vsr)
DNA repair and recombination proteins [BR:
har03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
HEAR1840 (vsr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
CAL61994
UniProt:
A4G657
LinkDB
All DBs
Position
complement(1850693..1851151)
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AA seq
152 aa
AA seq
DB search
MDIVDSLTRSRMMAGIRSKNTLPERLVRSFLHARGFRYRIHDKKLPGKPDIVLPKHCVVI
FIHGCFWHQHPACKNAVKPKTNSQKWIQKFSDNEERDQRNLLALKALGWRVIVLWECGLG
RKISDDQLGWLPDAIRSSAFDYLEWPVIVVTS
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atggacatagtcgactctttaacgcgatctcgaatgatggcgggaattcgatctaaaaat
actcttccagagagattggtgcgctcatttttacacgcgagaggtttcagataccggatt
cacgataaaaagctcccaggtaagccggatatagtccttcctaaacattgtgttgtgata
tttattcacggatgtttttggcatcaacatcctgcttgcaagaacgcagtgaagcctaaa
actaattcgcaaaaatggatacagaaattttcagataatgaagagcgcgaccaaagaaat
ctactggcactcaaagccctaggctggagagtaattgttttgtgggagtgcggcttggga
cggaaaatttctgatgatcagcttggctggttgccagatgcaatccgatcatcagcattc
gattatttggaatggccggttattgtcgttacatcctag
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