Herminiimonas arsenicoxydans: HEAR2045
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Entry
HEAR2045 CDS
T00490
Symbol
uvrB1
Name
(GenBank) UvrABC system protein B (Protein uvrB) (Excinuclease ABC subunit B)
KO
K03702
excinuclease ABC subunit B
Organism
har
Herminiimonas arsenicoxydans
Pathway
har03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
har00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HEAR2045 (uvrB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
har03400
]
HEAR2045 (uvrB1)
DNA repair and recombination proteins [BR:
har03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HEAR2045 (uvrB1)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HEAR2045 (uvrB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UB2H
Flavi_DEAD
AAA_30
AAA_22
NPHP3_N
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CAL62189
UniProt:
A4G6Q2
LinkDB
All DBs
Position
complement(2054464..2056440)
Genome browser
AA seq
658 aa
AA seq
DB search
MSTGTFILHSSYTPAGDQPEAIARLLSDIEEGATHQTLKGITGSGKTFTMANVIHRLKRP
TLILAPNKTLTAQLYGEMKHFFPENAVEYFVSYYDYFQPEIYMPGTDRFIPKDSAINDHL
ERLRLSTTKSLIERRDVIVVASVSSIYGLGDPEAYRALQIALSPGVKLNQRELIRRLALL
QYDRTERTLKRATFRAQGDVIDIFPADSEHRAVRVELLDDSVASVQWLDPVTGKTLGAID
HYLVSPKTLFAPPTNKIDSASKKILADMEERVAELNRNNRLVEANRLYERITHDVEMMRE
VGYCSGMENYSCYFSERDPASPPITLLDYLPKDGLLFVDESHVMVPQISAMYRGDQARKE
TLIDYGFRLPSSKNNRPLNFGEFEKVKPQTIFVSATPGDYELRVSKDRVVEQVIRPTGLL
DPKVEVRKADGYIDDLLAEISKCVKKKNRVLVTTLTKVSAEELTDFLTDNGIRARYMHSD
IKAEDRVEIINGLRAGEFDVLIGISLLREGLDIPEASLVAILDADRAGFLRSAHALIQMI
GRVARNENGKAILYADAVTPAMKQAIDETNRRRQLQIAFNEENGISPASSVRKLAGEETN
TEEPTVHSEAFCENLSDLCDQITAKEQQLLEFTDTGDEQRVEDIRRQLDGLYRQFIYI
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccggtacgttcattctgcactccagctatacgccggcgggggaccagccagag
gcgatagcgcgcctgctatcggacatagaagaaggtgcgacacaccagacgctgaagggt
atcaccggctctggtaagacctttacgatggccaatgtgattcatcgtctgaagcggccc
acgttgatcttggctcctaacaagacattgaccgcgcagctttatggtgaaatgaagcac
ttctttcctgagaatgctgtcgagtacttcgtttcctactacgattattttcagcccgag
atttatatgccgggcaccgatcgtttcattccaaaggactcggccatcaacgatcacctt
gagcgcctacgcctgtccacgaccaaatccttgattgagcgccgcgatgtgatcgtcgtc
gcttcggtgtcttcaatctacggcctgggtgacccggaggcgtaccgagcgttgcagatc
gctctgtcccctggggtcaaactaaaccagagagagctgattcgtcgtttggctctgctg
caatatgatcgcactgagcgcactctcaaacgtgcaacgtttcgcgctcaaggtgatgtg
atcgatatctttcctgctgattccgagcatagggcagttcgggtggaactgctggatgac
tctgttgcgtctgttcaatggctagaccctgttacaggtaaaacgcttggggcaattgac
cattacttggtttcgccaaagacgctttttgcaccgcccacgaataaaatagattccgcg
tccaagaagatactcgctgatatggaagagcgggttgccgagctgaacaggaataatcgc
ttggtcgaggcaaacaggctgtacgagcggatcacgcatgacgtggagatgatgcgcgag
gtaggctattgttcgggcatggaaaattattcctgctacttcagcgaacgggacccggcc
tcgcctccgatcacattgctggattacctgccgaaagatgggcttctgttcgtcgatgaa
tcccacgtcatggtgccacagatatccgcaatgtaccggggggatcaggcgcgcaaggag
acgttgatagattacgggttccgcttgccttcgtctaagaacaatcgcccgttgaacttt
ggtgaatttgagaaggtcaagcctcagaccatctttgtttccgctactccgggagactac
gagctgagggtgtcgaaagacagggttgtcgaacaagttatcagaccaacgggactgctt
gatcccaaggttgaggtgcggaaagcggacggatacatagatgacctgcttgccgaaata
tcgaagtgcgtgaagaagaaaaatcgcgtgctcgtgactacgctgacgaaggtcagtgca
gaagagctaacggatttcttgacggacaacgggattcgagcgcgctacatgcattcggac
ataaaagcggaggatcgtgttgagatcatcaatggcctgcgcgcaggagagttcgatgtt
ttgattgggattagtcttttgcgcgaagggctggatattccagaggcatcattggttgct
attctcgatgcagaccgtgcaggattcttgcgttcggcccatgctctcattcagatgata
ggtcgagtcgctcggaatgaaaacggcaaggcgatcttgtacgccgacgcggtgactccg
gcgatgaaacaggcgatcgatgaaaccaataggcgcaggcagcttcaaattgcctttaac
gaggaaaatgggatttctccggcctcgtctgtgcgaaaactagcaggagaagagacgaat
acggaggagcccaccgttcactccgaggctttctgcgagaatttgtccgacctttgcgat
cagatcactgccaaggaacagcagctactcgaatttaccgataccggtgacgagcagcgc
gtcgaagatattcgtcgtcagttggatggtttgtaccggcaattcatttacatctaa
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