Herminiimonas arsenicoxydans: HEAR2385
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Entry
HEAR2385 CDS
T00490
Name
(GenBank) Putative exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
har
Herminiimonas arsenicoxydans
Pathway
har03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
har00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HEAR2385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
har03400
]
HEAR2385
Enzymes [BR:
har01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
HEAR2385
DNA repair and recombination proteins [BR:
har03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HEAR2385
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
CAL62516
UniProt:
A4G7M9
LinkDB
All DBs
Position
2363768..2364532
Genome browser
AA seq
254 aa
AA seq
DB search
MKLATWNVNSLKVRLPQVQQWLVDNPVDVLCLQETKTVDEKFPVAEIEAAGYQVAFTGQK
TYNGVAILSRHPITDVTKNNPLLDDEQQRIIAGTIQGIRIVCAYVPNGQSPDSDKYIYKL
NWLKALHEWLAQEQQQHPELALLGDYNIAPEDRDVHDPAAWAGQVLVSEPERAAFVRLQE
MGFTDAFRMFEQPEKLYSWWDYRQMGFRLNRGLRIDHILLSAPLAARCSACVIDKVPRKW
EQPSDHTPVIATID
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgctacctggaacgtcaactctctcaaggttcgtctgccgcaagtgcagcaa
tggctggtcgataatccggtcgatgtgctctgcctgcaggaaaccaaaaccgtcgatgaa
aaatttcccgttgcggaaattgaagctgccggctatcaggtcgcgtttaccggccagaag
acttacaacggtgtagccatcctgtcgcgccatccgattaccgatgtgacgaaaaacaat
ccgctgctcgacgatgaacagcagcgtattatcgccggcaccattcagggcatacggatc
gtgtgcgcttacgtcccgaacggtcagtcgcccgattcggacaaatacatctacaagctg
aactggctcaaagccctgcatgaatggctggcgcaggaacagcaacagcatcccgaactt
gccttgctcggcgactacaacatcgcacctgaagatcgcgacgtgcatgatccggcggca
tgggcaggtcaggtgctggtttccgaaccggaacgcgctgccttcgtgcgtctgcaggag
atgggctttaccgatgccttccgcatgtttgaacagccggaaaaattgtatagctggtgg
gattaccggcaaatgggattccgcctgaaccgcggtttgcgtatcgatcacattctgctg
tcggcgccgctggctgcacgctgcagtgcctgcgtgatcgacaaggtgccgcgcaaatgg
gagcagccttccgaccacacgccggtaattgccaccatcgattaa
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