Herminiimonas arsenicoxydans: HEAR2438
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Entry
HEAR2438 CDS
T00490
Name
(GenBank) Pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
har
Herminiimonas arsenicoxydans
Brite
KEGG Orthology (KO) [BR:
har00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
har03009
]
HEAR2438
Enzymes [BR:
har01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
HEAR2438
Ribosome biogenesis [BR:
har03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HEAR2438
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CAL62568
UniProt:
A4G7T1
LinkDB
All DBs
Position
complement(2411133..2412749)
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AA seq
538 aa
AA seq
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MNRPTKNNTSDTPANDASPAEHADRTEPQQNAAAADENNAGKPVKRGLRGPRTLRRARNA
PRSGPANHDTPEEQNAVVVETQAVPASGEVRRERNPRRDERQPGTKGPQKSSGKSGGAGP
NRGSKPHSRGGDADDVFSFVTSEAFDTLSVDDDKAGGKRRPEQKSVRRDLTADDDAPKLH
KVLAEAGLGSRRDMEELIIAGRVSVNGEPAHIGQRILPADQVRINGKLIQRKVSNKPPRV
LVYHKPAGEIVSTNDPEGRPSVFERLPTMKAAKWLAVGRLDFNTEGLLLFTTSGDLANRL
MHPRYGIDREYAVRTLGELEEGMRQKLLAGVELEDGLAQFSKIADGGGEGVNKWYRVTIG
EGRNREVRRMFEAIGLTVSRLIRTRYGTLTLPKNLKRGRWEEMEEHAVRDLLAMSGLEKK
SVDGAPKGRNSPADRQNGNRAPRVDNGMGLPRSPSQWGNLGGQGRPQGQNGKPAGGRQGQ
GQPRSRQPDPLQTSLGFPGMGQPRRSNGPNRGPNGNGPSRGNNGPQGGQGGPRRRSKI
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtccaacgaaaaataatacctctgacacgccggccaatgacgcatcgccagca
gagcatgcagatcgtacggagcctcaacaaaacgccgcagctgcggatgaaaacaatgcc
ggcaagccggtaaaacgcggtttgcgcggcccacgcactttgcgtcgtgcccgcaatgcg
ccacgtagcgggcccgccaatcatgacactcctgaagagcaaaatgcagtagtagtggaa
acacaagctgtgcctgcttcgggggaggtgcgcagagagcgcaacccgcgtcgcgatgag
cgtcagcctggtacaaaaggaccgcaaaaatcgagcggaaaatcaggtggcgcaggtccg
aatcgcggcagcaagccgcattccagaggcggcgatgcggatgacgtattttccttcgtt
acctccgaagcatttgatacgctgtctgtcgacgacgacaaggctggcggtaaacgtcgc
cctgaacaaaaaagcgtgcgtcgcgatttgacggctgacgatgatgcgccaaagttgcac
aaggtgttggcggaagccggccttgggtcgcgtcgcgatatggaggagctgattattgcc
ggccgggtttcggtcaatggcgaaccggcgcatatcggtcagcgcatactgcccgccgat
caggtgcgtatcaacggcaaactgattcagcgcaaggtcagcaacaagccgccgcgcgtg
ttggtgtatcacaagccggcaggtgaaattgtcagtaccaacgatccggaaggccgccca
tcggtcttcgagcgtttgccgacgatgaaggcggccaaatggctggccgtcggtcgcctc
gatttcaataccgaaggtttgttgttgtttactacgtccggtgatctggctaatcgcttg
atgcacccgcgctatggtatcgaccgcgaatacgcagtgcgtaccttgggtgagctggaa
gaaggcatgcggcagaaattgctggcaggcgtggaactggaagacggtttggcgcaattt
tccaaaattgccgatggcggtggagaaggcgtcaacaaatggtatcgcgtgactatcggt
gaaggccgcaatcgcgaagtacgccgcatgttcgaagcgataggcttgacggtatcgcgc
ctgattcgtacgcgatacggtacgctgactttgccaaaaaatctcaagcgtgggcgctgg
gaagaaatggaagagcacgctgtgcgtgacttgctggcaatgagcggactggagaaaaaa
tctgtcgatggtgcccctaaaggacgcaatagtcctgccgatcgacaaaatggtaatcgt
gcgccgcgtgtggataatggtatgggactgccgcgcagtccaagccagtggggtaatctc
ggcggacaaggccgtccgcaaggacagaatggaaagcccgcgggaggtcgccaaggtcaa
ggacagccgcgcagccgtcagcctgatccgttgcaaacttcactcggttttccggggatg
gggcagccgcgtcgcagcaatggcccgaatcgtggtccgaacggcaacggtccatcgcgt
ggcaataatggtccgcaaggcggacagggcggaccgcgccgccgttccaaaatttaa
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