Herminiimonas arsenicoxydans: HEAR2663
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Entry
HEAR2663 CDS
T00490
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
har
Herminiimonas arsenicoxydans
Pathway
har03030
DNA replication
har03430
Mismatch repair
har03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
har00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HEAR2663 (holA)
03430 Mismatch repair
HEAR2663 (holA)
03440 Homologous recombination
HEAR2663 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
har03032
]
HEAR2663 (holA)
03400 DNA repair and recombination proteins [BR:
har03400
]
HEAR2663 (holA)
Enzymes [BR:
har01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HEAR2663 (holA)
DNA replication proteins [BR:
har03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HEAR2663 (holA)
DNA repair and recombination proteins [BR:
har03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HEAR2663 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
CAL62785
UniProt:
A4G8E8
LinkDB
All DBs
Position
2632729..2633745
Genome browser
AA seq
338 aa
AA seq
DB search
MQLRIDALATHLTKPLAGLYVITSDEHLLALEAADKIRQTARAQGFSEREVLVVDRSFKW
GELLAANQSQSLFGDKKLIELRIPTGKPGRDGGKALQDYAASLSPDNVTLITLPKLDWAT
QKAAWVASLQQASVFIDIPLVERAQLPAWLGVRLAAQGQSADRACLDFIAERVEGNLLAA
HQEIQKLALLYPAGPLSFEQVHDAVLNVARYDVFKLNEAMLSGDTARLVRMLEGLQGEGE
ALPLVLWAVAEEIRTLLKLKSGMAQGRPLSQLTKEHRIWGPRERLIEPALRRLKLATLES
ALQEAAQIDKMVKGLRAKKFSGDAWDAMLQLGLKIARG
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgcgcattgatgctctcgccacgcatttgaccaagccgctggccggcttgtat
gtcatcacgagcgacgaacatctgctggcactggaagcggccgacaagatacgtcagaca
gcgcgcgcacaaggtttctccgagcgcgaagtgctggtggtcgaccgcagtttcaagtgg
ggtgagctgctggccgccaaccagtcgcaatcgctgttcggcgacaagaaactgatagaa
ctgcgcatcccgaccggcaaaccgggcagggacggcggcaaggccttgcaggattatgcc
gcctcactcagccccgataacgtcacgctgatcactttgccgaaactggattgggcgacg
caaaaagcagcctgggtggccagcctgcagcaggccagcgtattcatcgatattccgctg
gtcgaacgcgcgcaactaccggcatggctgggcgtgcggctggcggcacaaggacaaagc
gccgatcgtgcatgcctggatttcattgccgaacgggtcgagggcaatctgctcgccgcg
catcaggaaatccagaagcttgcgctgctgtatccggcaggtccgctgagtttcgagcag
gtacacgatgccgtgttgaatgtggcgcgctacgacgttttcaagctgaatgaagcgatg
ctgagcggcgacaccgcacgtctggtgcgcatgctggaaggtttgcaaggcgaaggggaa
gcgctgccgctggtcttgtgggcggtagccgaagaaatccgcaccttgctgaaattaaaa
tccggcatggcgcaaggccgccctttgagccagttgacgaaagaacatcgcatctggggc
ccgcgcgaaaggctgatcgaaccggccttgcgccgtttgaaactggcgacgctggaaagc
gcactgcaggaagccgcacaaatcgataagatggtgaaaggtttgcgcgccaagaaattt
tccggcgatgcctgggatgcgatgctgcaattgggattgaagatcgcacgcggctag
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