Herminiimonas arsenicoxydans: HEAR2704
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Entry
HEAR2704 CDS
T00490
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
har
Herminiimonas arsenicoxydans
Pathway
har03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
har00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HEAR2704 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
har03019
]
HEAR2704 (recQ)
03400 DNA repair and recombination proteins [BR:
har03400
]
HEAR2704 (recQ)
Enzymes [BR:
har01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HEAR2704 (recQ)
Messenger RNA biogenesis [BR:
har03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HEAR2704 (recQ)
DNA repair and recombination proteins [BR:
har03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HEAR2704 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
CAL62826
UniProt:
A4G8I9
LinkDB
All DBs
Position
complement(2674928..2676754)
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AA seq
608 aa
AA seq
DB search
MNNRQDDLGAQALHVLESVFGYSSFRGEQAEIVDLVTRGGDALVLMPTGGGKSLCYQIPS
LLRDGVGVVISPLIALMQDQVDALAEVGVRAAFLNSTQTFEESSRIERRLRSGDLDLVYV
APERLMTPRCLDLLEASKIALFAIDEAHCVSQWGHDFRPEYIRLSILHERFPNVPRIALT
ATADHQTREEIAHRLQLDNARMFVSSFDRPNIRYQIVEKANGRKQVLDFIESEHAGDAGI
VYCLSRKKVEETAEFLRENGISALPYHAGMDFATRSKNQARFLREESIVMVATIAFGMGI
DKPDVRFVAHLDLPKSIEGYYQETGRAGRDGAAANAWMAYGLQDVVQQRRMIDESEADET
FKRVQGVKLDAMLGLCETLHCRRQRLLTYFGQSSAPCGNCDTCLNPPRSFDATVAVQKLL
STIYRVDQRFGAMHVLDVLRGVDSDKVKQWQHDQVSTFGIGSDRSEAEWRAILRQSIALG
LVAVDHEAYSALKLTDAARPVLKGGEKVQLREYQKPVKSRRTSSKPKGFIETDLSAEEQA
IFEKLRWWRMETARTHNVPAYVIFNDATMREIAKTQPATLADLRGVSGVGEKKLESYGAD
IVALIAAM
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaggcaggatgatctgggcgcgcaggcgctgcatgtactggagtcggtgttc
ggttattcgtcctttcgcggcgaacaggccgagatcgtcgatctcgttacgcgcggcggc
gatgcgctggtgctgatgcctaccggcggcggaaagtcgctgtgctatcagataccttcc
cttctgcgcgatggcgtcggcgtcgtgatttcgccgctgatcgccctgatgcaggatcag
gtcgacgcgctggctgaggtcggcgtacgcgcggcattcctgaattccacccagaccttt
gaagagtcgtcgcgtatcgagcgtcgcttgcgtagcggcgatctcgatctggtgtatgtc
gcgcccgaacgcctgatgacaccgcgttgcctcgacctgctggaagcgtcgaagattgcg
ttgtttgcaattgatgaagcgcattgcgtctcgcaatgggggcatgacttccgtcctgaa
tatatccggctgtcgattctgcacgagcgatttccgaacgtcccgcgcatcgcgctgacg
gcgaccgccgatcaccagacgcgtgaagaaattgcccacaggctgcagctcgacaatgcg
cgcatgttcgtgtcgtctttcgaccggccgaacatacgctatcaaattgtcgagaaagcc
aacggccgcaagcaggtgctggatttcatcgagagcgaacatgcgggcgatgccggtatc
gtgtattgcctgtcgcgtaagaaagtggaagaaacggcagaatttttgcgcgaaaacggc
atcagcgccttgccgtatcacgccggcatggatttcgcgacacgcagcaaaaaccaggcg
cgtttcctgcgtgaagaaagcatcgtgatggtggccaccatcgccttcggcatgggcata
gacaagccggacgtgcgtttcgtcgcccatcttgatctgccgaaaagcatagaaggctat
taccaggaaaccggccgcgctggtcgcgacggcgccgcagcgaatgcctggatggcttac
ggtttgcaggacgtggtgcagcagcgccgcatgatagacgagtcggaagccgacgaaact
ttcaagcgcgtgcagggcgtcaagctcgacgccatgctgggtttgtgcgaaaccctgcat
tgccggcgccagcgtctgctgacttacttcggccagtcgtcggcgccgtgcggtaattgc
gatacctgcctgaatccgccgcgttctttcgatgcgaccgttgccgtacaaaagctgctg
tcaacgatctatcgtgtcgatcagcgcttcggcgcgatgcatgtgctggacgtcttgcgc
ggggtggattcggacaaggtgaagcaatggcagcacgaccaggtttccactttcggcata
ggctccgaccgcagcgaggcggaatggcgggcgattttgcgccagtcgattgcgcttggt
ctggttgcggtcgatcatgaagcgtacagcgccctgaagctgaccgatgccgcacgtccg
gtgttgaagggcggcgagaaggtgcagttgcgcgaatatcagaaacccgtcaaatcccgg
cgtacaagcagcaagcccaagggttttatcgaaaccgatctgtcggcagaagagcaggcg
attttcgagaaattgcgctggtggcgcatggaaacggcacgcacgcacaatgtaccggcc
tatgtcatcttcaacgatgcaaccatgcgcgaaatcgccaagacgcagccggctactctg
gccgatctgcgcggcgtcagcggtgtcggcgaaaagaaactggaaagctacggcgcggat
atcgtggccttgattgcagcgatgtag
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