Herminiimonas arsenicoxydans: HEAR3129
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Entry
HEAR3129 CDS
T00490
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase (DAP decarboxylase)
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
har
Herminiimonas arsenicoxydans
Pathway
har00300
Lysine biosynthesis
har00470
D-Amino acid metabolism
har01100
Metabolic pathways
har01110
Biosynthesis of secondary metabolites
har01120
Microbial metabolism in diverse environments
har01230
Biosynthesis of amino acids
Module
har_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
har_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
har00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HEAR3129 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HEAR3129 (lysA)
Enzymes [BR:
har01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HEAR3129 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
FAM47
Motif
Other DBs
NCBI-ProteinID:
CAL63238
UniProt:
A4G9Q1
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All DBs
Position
3091701..3092984
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AA seq
427 aa
AA seq
DB search
MSHFSYQDGVLCAEHTPLTQIARQFGSPTYIYSKAALVENFSSYADACKKHGRTDDTALV
CYSVKSNSNLAVLQLLGKLGSGFDIVSGGELLRVLAAGGSPRKVIFSGVGKSREEMQLAL
SHDILCFNVESIPELHRLNEVAGEMGKRASVSLRVNPNVDAKTHPYISTGLKDNKFGVAY
EDALTTYRVASALPNISVVGIDCHIGSQLLDDAPLLEAVDKLIELIDALAAEGIVIHHLD
IGGGIGINYDNDKPVAVGDYLARVFAKVDAWRAKNHAGAPIKVLFEPGRSIVGNAGILLT
EVQYIKHGETKNFAIVDAAMNDLMRPAMYEAWHGVQPVLQRHVAAQTYDVVGPVCESGDW
LARSRELAIQEGDLLAIMSAGAYGMTMSSNYNTRGRAAEVMVDGATVHLIRKRELASDLF
ALETLLP
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatttttcctatcaagacggcgtcctgtgcgcagagcacacaccgctgacgcaa
atcgcccggcaattcggttcgccgacttacatttactccaaggctgcgctggtcgagaat
ttctcttcctatgcggacgcctgcaagaagcatggccgcaccgatgatacggcgctggtg
tgctattcggtcaaatccaactcgaacctggcggtgctgcaactgctcggcaaactgggt
tccggcttcgacatagtctccggcggtgaactgttgcgcgtgctggcggcaggcggttcg
ccgcgcaaggtcattttttccggcgtcggaaaatcgcgcgaggaaatgcaactcgccttg
tcgcacgacatcctgtgcttcaatgtggaatcgattcccgaactgcacaggctcaatgag
gtcgccggcgaaatgggcaagcgcgcttccgtctcactgcgcgtcaatccgaatgtcgat
gcaaaaacccatccgtatatttcaaccggattgaaagacaacaagttcggtgtcgcctat
gaagatgcgctgacgacctatcgcgttgccagtgcactgcctaacatcagtgtggtcggc
atcgattgccatatcggttcgcaattgctggacgatgctcccttgctggaagctgtcgat
aaattgattgaactgatcgatgcgctggcggcagaagggatcgtgattcatcatctggat
atcggcggcggcatcggcatcaattacgacaatgacaaaccggtcgcagtcggtgattac
cttgcgcgcgtatttgccaaggttgatgcctggcgcgcgaagaatcatgccggcgcaccg
atcaaggtgttgtttgaacctggccgctcgatagtcggcaatgccggcatcctgctgact
gaagtgcagtacatcaaacacggcgaaacgaaaaactttgccatcgtcgatgccgccatg
aacgacttgatgcgtcctgcgatgtatgaagcctggcatggtgtgcaaccggtattgcag
cgccatgttgcagcacaaacctacgatgtggtcggcccggtgtgtgagtccggcgactgg
ctggcgcgctcgcgcgaactggccattcaggaaggcgatctgctggccatcatgtcggcc
ggcgcctacggcatgaccatgtcgtcgaactacaatacgcgcggccgcgcggccgaagtc
atggtcgatggtgcaacggtccacctgatacgcaagcgcgaattggcaagcgatctgttt
gcgctggaaacgctactgccgtaa
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