Natranaeroarchaeum sulfidigenes: AArcS_1787
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Entry
AArcS_1787 CDS
T07875
Symbol
recB
Name
(GenBank) ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hara
Natranaeroarchaeum sulfidigenes
Pathway
hara03420
Nucleotide excision repair
hara03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hara00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AArcS_1787 (recB)
03430 Mismatch repair
AArcS_1787 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hara03400
]
AArcS_1787 (recB)
Enzymes [BR:
hara01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AArcS_1787 (recB)
DNA repair and recombination proteins [BR:
hara03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AArcS_1787 (recB)
MMR (mismatch excision repair)
Other MMR factors
AArcS_1787 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
DUF2800
Motif
Other DBs
NCBI-ProteinID:
QSG02997
UniProt:
A0A897MR40
LinkDB
All DBs
Position
complement(1711443..1714292)
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AA seq
949 aa
AA seq
DB search
MSEFAPNPGQRELIDSTEGTYLVDAGAGTGKTFSITRRYAGIVDGEGVEPDDVLLVTFTN
NAAAEMRERIVDRSAYGTRELKDAPIQTFHSLCHDLLLEHGHDAPELLGIDDHITDSTRL
LDDEFVERSRFGEFVDCFSDDRPEYDDVFAALSEPRDLLDLLHELAAKGVFPTATGWYRD
GERHLDGDFAAFKDIFDERNEPRNGGNKQSALRSVLYSYGDSGTYLPDAPSKSEIRGEGK
QVPDVLANHAFHEDRERLKSFVHDVYWGYLRFSLRRNYLNFGFLQLLAYVLLCENHALRE
RIAFEYVMIDEFQDTSEIQFKLGLLCAGTENFCVVGDWKQSIYGFQYADVENIVAFEDRL
ERFAAELNRDHDRVGFEQPDVETISLVENYRSTDVILDLAEDGLVAPATSTEDVDAESIL
EDVTSLDAVSDYDHSRIEAFQSEDEQEALLSRIHDIVGDERFPVEGEDGELRAPEYGDMA
VLTRRREFGRELLAAATENGLPMAYEGGVEIYRTDPAKLLLAWLRVLEYDADRGWAPLLE
RVGYSLPEIDAMLSSGTYPQNLVGFADELRDRETVGAIARHVFERYGYDGPVADAILHAV
QSVHDATTMSRGDLLRYIERGIETGTTREVHVGAGTDAVTVQTIHATKGLEHPIVILADM
NQHSFPPSGGGTSDITFGDPVGLRQRTVFDAEAYDRPHVFRNWRSDVLNRTLPRDYDEER
RLLYVAITRAEHHVLFSAGETPSSFLESLPVEVEEIDPELSDVSAASGEKPGFTPDVRGR
DGPAAETPHTIMRDDVFEGVDDGRGVEFGSRVHEFAEAYALGESVTPRNDDERAVAAFLD
DLDGTLVVEEDVHLPLRIDGETITITGVVDLVHVADDRVDVIDYKTDRGRHAEDEYRKQL
NVYHHVLEASYPDREVTTSIFYTDGGERVPVEPLSETELEGVVSAARER
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagttcgcgccgaaccccggtcaacgagaactgatcgacagcaccgaggggacc
tacctcgtcgacgccggggccgggacgggaaagacgttctcgatcacgcgccggtacgcc
ggaatcgtcgacggggagggcgtcgaacccgacgatgtattgctcgtcacgttcacgaac
aacgccgccgcggagatgcgagagcgcatcgtcgaccgctctgcgtacgggacacgcgaa
ctgaaagacgcgccgatccagacgtttcactccctgtgtcacgacctgctgctcgaacac
ggccacgacgcgccggaactgctgggtatcgacgaccatatcactgactcgacacggctg
ctcgacgacgagttcgtcgagcgcagtcggttcggcgagttcgtcgactgcttcagcgac
gatcgtccggagtacgacgacgtcttcgccgcgctctcggagccgagagacctgctcgac
ctgctccacgaactcgcggcgaagggcgtcttcccgacggccacgggatggtacagggac
ggcgagcgccacctcgatggtgacttcgcggcgttcaaagatatcttcgacgagcgcaac
gagccgcgaaacgggggcaacaagcaatctgcgctccgctccgtactgtacagctacggc
gactccggcacgtatctgccggacgcaccgtccaaatcagagattcgcggcgagggcaag
caggtgcccgacgtgctcgccaatcacgcgttccacgaggaccgcgagcgactcaaatcg
ttcgttcacgacgtctactggggctatctccgtttttcgctccgccggaactacctgaac
ttcggcttcctgcagctgctcgcatacgtgttgctctgtgagaatcacgcgttgcgcgag
cgcatcgccttcgagtacgtgatgatcgacgagttccaggatacgagcgagatccagttc
aaactcgggttgctctgtgcaggcaccgagaatttctgtgtcgtcggggactggaaacag
agcatctacgggttccagtacgccgacgtcgaaaacatcgtcgcgttcgaggatcgactg
gagcgtttcgccgcggagttgaaccgcgaccacgaccgggtcggcttcgaacagccggat
gtggagacgatctcgctcgtcgagaactaccgatcgaccgatgtgatcctcgacctcgca
gaggatggactggtcgctccggcgacgagcacggaagacgtggatgcggagtcgatcctc
gaggacgtcacgtcgctcgacgccgtttccgactacgaccactcccggatcgaggccttt
cagagcgaggacgaacaggaggcgctcctctcgcggatccatgatatcgtcggggacgaa
cggtttcccgtcgagggcgaggacggcgaactccgagcgccggagtacggtgacatggcg
gtgctgacgcgccgccgcgagttcggccgcgaactgctggcggcggccaccgagaatggc
ctccccatggcctacgagggcggcgtcgagatctatcggaccgacccggcgaaactgctg
ctcgcgtggctgcgggttctggagtacgatgcggaccgtgggtgggccccgctgctcgaa
cgtgtgggctactcgctgcccgagatcgacgccatgctatcctcggggacttacccccag
aacctggtcgggttcgccgacgaactacgcgaccgcgagacggtgggtgcgattgcccga
cacgtcttcgagcgctacggctacgacggtccggtcgccgacgctatcttgcatgccgtc
caatccgtccacgacgcgacgacgatgagccgcggcgacctgctccggtacatcgagcgc
ggcatcgagaccgggacgacccgcgaagtccacgttggggcagggacggacgccgtcacc
gtccagacgatccacgcgacgaaggggctcgaacatcccatcgtgattcttgcggacatg
aatcaacactcgttcccgccatccggcggcgggacgagcgatatcacgttcggtgatccg
gtggggctccgacagcggacggtcttcgacgccgaggcgtacgaccggccacacgtcttc
cgaaactggcgctcggacgtcctgaatcggacactcccacgggactacgacgaggagcgc
cgtctgctctacgtagcgattacacgcgccgagcaccacgtcctcttttcggcgggcgag
acacccagttccttcctcgaatcgctcccggtcgaggtcgaagagatcgacccggagctg
tccgacgtatcggcagcctccggtgagaaaccggggttcacaccagacgtacggggtcgt
gacgggccggcagcagaaacccctcacaccatcatgcgcgacgatgtcttcgagggcgtg
gatgatgggcgtggtgtcgagttcggtagtcgggtccacgagttcgcagaagcctacgcg
ctcggtgagtcagtcaccccacgcaacgacgatgagcgtgcagtcgcagcgtttctcgat
gatctggacggcacgctggtcgtcgaggaggacgtccacctgccgcttcgtatcgacggc
gagacgataacgatcaccggcgtcgtcgatctggtccacgtcgccgacgaccgtgtcgac
gtgatcgattacaagaccgaccgtggccgccacgccgaggacgagtaccgaaaacagttg
aacgtgtatcatcacgtcctcgaagcttcctaccccgaccgtgaggttacgacgagtatt
ttctacacggacgggggcgagcgcgtccccgtggaaccgctctcggagacggagttagaa
ggtgtcgtctcggcggcgcgcgaacgttga
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