Natranaeroarchaeum sulfidigenes: AArcS_2056
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Entry
AArcS_2056 CDS
T07875
Symbol
tfa1
Name
(GenBank) Transcription initiation factor IIE, alpha subunit
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
hara
Natranaeroarchaeum sulfidigenes
Pathway
hara03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hara00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AArcS_2056 (tfa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hara03021
]
AArcS_2056 (tfa1)
Transcription machinery [BR:
hara03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
AArcS_2056 (tfa1)
Prokaryotic type
Archaeal type
TFE
AArcS_2056 (tfa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Sigma70_r3
DNA_ligase_ZBD
zf-Mss51
DUF7129
NRDD
Zn_ribbon_6
Zn_ribbon_8
Zn_ribbon_3
HypA
Motif
Other DBs
NCBI-ProteinID:
QSG03256
UniProt:
A0A897MYQ9
LinkDB
All DBs
Position
1981461..1981991
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AA seq
176 aa
AA seq
DB search
MAFEELLEDPVIQKYLHELVGPKGMPVAAAPPDGEVTDEELAEELDMELNDVRRALFILY
ENDLATYRRLRDEDSGWLTYLWTFEYDKIPENLEEEMHRLYEALDERREYERNHEFYLCE
VCSIRFEFGEAMDFGFECPECGSPVEAMENTHLVDAMDRRLENLRDELNLDSEVEA
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaggagctcctcgaggatcccgtcatccagaagtacctacacgagctcgtc
ggtccgaagggaatgccggtcgcggcggcccctccggacggcgaggtaaccgacgaggaa
ctggccgaggaactcgacatggaactcaacgacgtccgccgggcgctgttcatcctctac
gagaacgacctggcgacgtatcgacgactccgtgatgaggattccggctggctaacctat
ctatggaccttcgagtacgacaagatccccgagaatctagaagaggagatgcaccggttg
tacgaggcgctggacgagcggcgggagtacgagcgcaaccacgagttctacctctgtgag
gtctgttcgatccgcttcgagttcggtgaagcaatggactttggcttcgagtgtcccgag
tgtggctcgcctgtcgaggcgatggagaacacccacctcgtcgacgcgatggaccggcga
ctggagaacctgcgggacgaactgaatctcgacagcgaggtcgaggcctga
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