KEGG   Natranaeroarchaeum sulfidigenes: AArcS_2332
Entry
AArcS_2332        CDS       T07875                                 
Symbol
cdc483
Name
(GenBank) ATPase of the AAA+ class, CDC48 family
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
hara  Natranaeroarchaeum sulfidigenes
Pathway
hara04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:hara00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    AArcS_2332 (cdc483)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hara03019]
    AArcS_2332 (cdc483)
   03009 Ribosome biogenesis [BR:hara03009]
    AArcS_2332 (cdc483)
   04131 Membrane trafficking [BR:hara04131]
    AArcS_2332 (cdc483)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hara04147]
    AArcS_2332 (cdc483)
Messenger RNA biogenesis [BR:hara03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     AArcS_2332 (cdc483)
Ribosome biogenesis [BR:hara03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    AArcS_2332 (cdc483)
Membrane trafficking [BR:hara04131]
 SNARE
  SNARE associated proteins
   Others
    AArcS_2332 (cdc483)
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    AArcS_2332 (cdc483)
Exosome [BR:hara04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   AArcS_2332 (cdc483)
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N AAA_16 RuvB_N CDC48_2 AAA_5 TIP49 AAA_22 AAA_2 AAA_33 AAA_14 nSTAND3 NPHP3_N RNA_helicase IstB_IS21 AAA_28 AAA_7 Mg_chelatase ABC_tran AAA_17 AAA_18 Sigma54_activat DUF815 AAA_3 ATPase NB-ARC Parvo_NS1 AAA_24 TsaE AAA_30 AAA_lid_PRS2_C AAA_11 PhoH Vps4_C SLFN-g3_helicase NACHT Zeta_toxin ResIII IPT DUF6985
Other DBs
NCBI-ProteinID: QSG03528
UniProt: A0A897MU11
LinkDB
Position
complement(2247963..2250185)
AA seq 740 aa
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGADTTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVTIKKAEAQKADSLVLAPPEEASVQFGSDAAGMVKRQIL
KRPVVGRDIVPVMSSTNHPFMRSPGQAIPLIAVETEPEGVVLVTEDTDVELREEPISGFE
KTGGGITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEV
GREEILQIHTRGMPLSDDVNLGHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEE
DIPPSLIDRMIVKRQDFRGALNEVEPSAMREVLVELPKISWDDVGGLDEAQQQIQESVEW
PMSSPEKFTRMGVEPPKGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVSPTVIFFDELDSLAPARSQEMGSNVSERVVNQLLTELDGLEEMGEV
MVIGATNRPDMIDPALIRSGRFDRLVMVGQPNVEGREQILNIHTDDTPLAADVSLREIAE
ITDGYVGSDLESIAREAAIEALRENDDAESVEMRHFRQALEDVRPTITEDILDYYEQMKD
EFKGGGSDPRGRQGGRIGFQ
NT seq 2223 nt   +upstreamnt  +downstreamnt
atgaacgaagttcaactggaagtcgcgaaagcctaccccaacgactcggggcgtggcatc
gctcgtctcgatccggatacgctgttgcatctcaagctcagccctggtgacatcatcgaa
atagagggggcagacaccactgccgccaaggtctggcgtgcggaccgtcaggactggaac
accgacaccgtccggatcgacgggttcactcgtcagaacgcagatgtcggcattggcgag
cgcgtcacgatcaagaaggctgaagcccagaaggccgactcactcgtgctcgcaccgccc
gaggaggcgagcgtacagttcggctccgatgctgccgggatggtcaaacgccagatcctc
aagcggccggtcgtcggccgcgatatcgtccccgtgatgtcgagtacgaaccacccgttc
atgcgctcgcccggacaggcgatcccgctgatcgccgtcgagaccgagcccgaaggcgtc
gtactcgtgaccgaggacaccgacgtcgagctgcgcgaggagccgatcagcggcttcgag
aagaccggcggtggcatcacctacgaggacatcggcggcctgcagaacgagatccagcgg
gtccgcgagatggtcgagttgccgatgaaacacccgcagatcttcaagaaactcggcatc
gagccgccacagggggttctgctccacgggccgccgggtaccgggaagaccctccttgcg
aaagcagtcgccaacgagacctctgccagtttcttctctatcgccgggccggagatcatc
tcgaagtactacggggaaagcgaacagcagctccgggagatcttcgaggatgcgaccgag
gagtcgccctcgatcatcttcatcgacgaactcgactcgatcgcaccgaagcgcgaggac
gtcaccggcgaggtcgagcgccgggtcgttgcccagctactgacgatgatggacgggctc
gaatcacggggacaggtcatcgtcattgcggcgacgaaccgcgtcgattcggtcgatccc
gcgcttcggcgtccgggccggttcgaccgcgagatcgagatcggcgtccccgacgaggtg
ggtcgggaggagatcctccagatccacacccgcgggatgcccctgtccgacgacgtcaac
ctcggtcatctggccgacgaaacccacggcttcgtcggcgcggacatcgagagcctgacc
aaagaggcggcgatgaaggccctgcgccgttacctccccgagatcgatctcgacgaggag
gacattccgccgagtctgatcgatcggatgatcgtcaagcgccaggacttccgcggggct
ctgaacgaggtcgaaccatcggcgatgcgggaggtacttgtcgagttgccgaagatcagc
tgggacgacgtcggggggctcgacgaggcccaacagcagattcaggagagcgtcgagtgg
ccgatgtccagcccggagaagttcacccggatgggcgtagagccgcccaagggcgtcctg
ctgtacggtccgccggggaccggcaagacgctgatggcgaaggcagtggccaacgaaacc
aatgcgaacttcatcagcgtccgcggcccacagctactcagcaagtgggtcggcgaatcc
gagaaggcgatccgacagaccttccgcaaagcgcggcaggtctcgccgaccgtgatcttc
ttcgatgaactcgatagtctcgcgcccgcccgcagccaggagatgggctcgaacgtctcc
gagcgggtcgtcaaccagctcctgaccgaactcgacgggctcgaagagatgggtgaagtg
atggtgatcggcgcgaccaaccgcccggacatgatcgacccggccctgatccgctcgggc
cggttcgaccgactggtcatggttggccagcccaacgtcgaggggcgcgagcagatcctc
aacatccacacggacgatacgccgctggccgcggacgtgagcctgcgcgagatcgccgag
atcacggatggctacgtcggtagcgacctcgaatcgatcgcccgggaagcggcgatcgag
gccctccgtgagaacgacgacgccgaatcggtcgagatgcgccacttccggcaggccctg
gaggacgtccggccgacgattaccgaggacatcctcgactactacgagcagatgaaagac
gagttcaagggtggcgggagcgatcctcgcggccgacagggcggtcggatcggcttccag
tga

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