Halococcoides cellulosivorans: HARCEL1_00165
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Entry
HARCEL1_00165 CDS
T05406
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
harc
Halococcoides cellulosivorans
Pathway
harc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
harc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HARCEL1_00165 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
harc03021
]
HARCEL1_00165 (rpoB)
Enzymes [BR:
harc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HARCEL1_00165 (rpoB)
Transcription machinery [BR:
harc03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
HARCEL1_00165 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Zn_ribbon_NOB1
Auto_anti-p27
Zn_Ribbon_TF
Zn_ribbon_8
DUF5817
DUF7575
HypA
zf-UBR
DUF5816
Motif
Other DBs
NCBI-ProteinID:
AWB26244
UniProt:
A0A2R4WXH1
LinkDB
All DBs
Position
complement(37232..39064)
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AA seq
610 aa
AA seq
DB search
MSQGRDAKVYVNGSLVGTHPDPEQLADQIRDSRRTGEISEMVNVSVDQRTDEVIINADAG
RARRPLLIVEDGEVLLPEEAIEALHEGEVDFEDLVDQGYVEFIDAEEEEDILVAVEPEDL
TEDHTHMEIDPQLIFGISAGMVPYPEHNASPRITMGSRMLRQSLGLPAANYRVRPDTRQH
LFHYPQLSMVTTQSTTQIGYDERPAGQNFTVAVMSYEGFNIEDALVMNQGSVERALARSH
FFRTYEGEERRYPGGQEDRFEIPDDEVRGARGEDAYTHLDEDGLINPEERVGDNAVLLGK
TSPPRFLEEPDDMGGLSPQKRRETSVTMRSGEDGIVDTVMLMESEDGSKLAKVKVRDERQ
PELGDKFASRHGQKGILGHIAPQEDMPFTQEGVTADLVLNPHALPSRMTVGHILEMLGGK
VGALEGRRVDGTPFTGEDEERLREGLEEHGFKSSGKEVMYSGVSGEKIEAEIFVGDIFYN
KLYHMVSNKLHARSRGPVQVLTRQPTEGRAREGGLRLGEMERDVLIGHGAALALKERLLD
ESDREFLYVCEECGMTAVEDINQNRVYCPNCGEETDVHEIEMSYAFKLLLDEMKALGIAP
RLNLESAVAS
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaggacgcgacgccaaagtgtacgtcaacggtagcctggtcgggacccatccc
gaccccgaacaactcgccgaccagatccgcgattcccgccgtaccggcgagatcagcgag
atggtcaacgtctccgtggatcagcgcacggacgaggtgatcatcaacgccgacgccggt
cgggcgcggcgacccctgctgatcgtcgaggacggcgaggtgctgctccccgaggaagcg
atcgaggcgctccacgagggcgaggtcgatttcgaggacctcgtcgaccagggctacgtc
gagttcatcgacgccgaagaggaagaggacatcctcgtcgccgtcgagccagaggatctg
accgaggatcacacccacatggagatcgacccgcagttgatcttcgggatcagcgcgggg
atggtcccctaccccgagcacaacgcgagcccccggattacgatggggtcgcgcatgctc
cgccagtcgctgggcctgcccgccgcgaactaccgcgtccggccggacacgcgccagcac
ctgtttcactacccgcagttgtcgatggtcacgacccaatcgaccacccagatcgggtac
gacgagcgccccgcgggccagaacttcaccgtcgcggtgatgagctacgaggggttcaac
atcgaggacgcgctcgtcatgaaccaggggtcggtcgagcgcgcgctcgcccgctcgcat
ttcttccggacctacgagggcgaggagcgacgctatcccggtggacaggaggaccgcttc
gagatccccgacgacgaggtgcgtggcgcgcgcggtgaagacgcctacacccacctcgac
gaggacggcctgatcaaccccgaagagcgcgtcggcgacaacgccgtgttgctcgggaag
acctccccgccgcgcttcctcgaagagcccgacgacatgggcgggctcagcccccagaag
cgccgcgagaccagcgtgacgatgcgctcgggcgaggacggcatcgtcgacacggtcatg
ctgatggaaagcgaggacggctcgaaactcgcgaaagtcaaagtgcgcgacgagcgccaa
cccgaactcggcgacaagttcgcctcccggcacggccagaaaggaatcctgggccacatc
gccccccaggaagacatgccgttcacccaggaaggcgtcaccgcggacctggtgctcaac
ccccacgccctcccctcacggatgaccgtcgggcacatcctggagatgctcggcgggaag
gtcggcgctctcgaaggacgacgcgtcgacgggacgccgttcacgggcgaggacgaggag
cgtctgcgcgagggcctcgaagagcacggcttcaagtcctcgggcaaggaggtcatgtac
tcgggcgtcagcggcgagaagatcgaggccgagatcttcgtcggagacatcttctacaac
aagctgtaccacatggtctcgaacaaacttcacgcgcgctcgcgcggccccgtccaggtg
ctgacccgccagcccaccgaggggcgcgcccgcgagggtggcctgcgcctgggcgagatg
gaacgcgacgtgctcatcgggcacggcgcggcgctcgcgctcaaagagcgcctgctcgac
gagtccgaccgggagttcctctacgtctgcgaggagtgtggcatgaccgccgtcgaggac
atcaaccagaatcgggtttactgcccgaactgcggcgaagagaccgacgtccacgaaatc
gagatgagttacgcgttcaaactcctgctcgacgagatgaaagccctcggcatcgcgcca
cgcctgaacctcgaaagcgcggtcgcgtcctga
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