Halococcoides cellulosivorans: HARCEL1_00855
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Entry
HARCEL1_00855 CDS
T05406
Name
(GenBank) transcription factor
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
harc
Halococcoides cellulosivorans
Pathway
harc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
harc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HARCEL1_00855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
harc03021
]
HARCEL1_00855
Transcription machinery [BR:
harc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
HARCEL1_00855
Prokaryotic type
Archaeal type
TFE
HARCEL1_00855
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
DUF7129
Zn_ribbon_8
Zn_ribbon_6
zf_UBZ
HypA
zf-Mss51
DUF1451
Zn_Ribbon_TF
Zn_ribbon_CLPX_N
Sigma70_r3
RUBY_RBDX
DUF7130
DUF7117
DZR
DUF8106
Zn_ribbon_RPAB4
DUF7560
Motif
Other DBs
NCBI-ProteinID:
AWB26368
UniProt:
A0A2R4WXV4
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All DBs
Position
169944..170468
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AA seq
174 aa
AA seq
DB search
MAFDGLLEDPVIQKYLHELVGPTGMPVAAAPPDGEVTDEELAETLDLELNDVRRALFILY
ENDLASYRRLRDEDSGWLTYLWTFEYQNIPEQLESELHRLLEGLERRREYETDHQFYLCE
QCGIRFEFEEAMDVNFECPDCGSSLQSMENTALVDAMDGRIDELRAELNVERVA
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgacggtctcctggaagaccccgtcatccagaagtacctccacgaactcgtg
ggcccgacgggcatgccggtcgccgctgcaccgccagacggcgaggtgaccgacgaggaa
ctcgccgagacactcgatctggagttgaacgacgtccgccgggcgctgttcatcctctac
gagaacgaccttgcgagttaccgccggttgcgcgacgaggactcggggtggctgacctac
ctctggacgttcgaataccagaacatccccgaacagctggaatcggaactccaccgcctg
ctggagggactcgaacgccgtcgggagtacgagaccgaccaccagttctacctgtgtgag
cagtgtgggatccgcttcgagttcgaggaggcgatggacgtgaacttcgagtgtcccgac
tgtgggagttcgctgcagtccatggagaacaccgcgctcgtcgacgcgatggacggccgg
atcgacgagttgcgtgcggaactcaacgtcgagcgggtggcctga
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