KEGG   Halococcoides cellulosivorans: HARCEL1_00855
Entry
HARCEL1_00855     CDS       T05406                                 
Name
(GenBank) transcription factor
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
harc  Halococcoides cellulosivorans
Pathway
harc03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:harc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    HARCEL1_00855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:harc03021]
    HARCEL1_00855
Transcription machinery [BR:harc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     HARCEL1_00855
 Prokaryotic type
  Archaeal type
    TFE
     HARCEL1_00855
SSDB
Motif
Pfam: TFIIE_alpha DUF7129 Zn_ribbon_8 Zn_ribbon_6 zf_UBZ HypA zf-Mss51 DUF1451 Zn_Ribbon_TF Zn_ribbon_CLPX_N Sigma70_r3 RUBY_RBDX DUF7130 DUF7117 DZR DUF8106 Zn_ribbon_RPAB4 DUF7560
Other DBs
NCBI-ProteinID: AWB26368
UniProt: A0A2R4WXV4
LinkDB
Position
169944..170468
AA seq 174 aa
MAFDGLLEDPVIQKYLHELVGPTGMPVAAAPPDGEVTDEELAETLDLELNDVRRALFILY
ENDLASYRRLRDEDSGWLTYLWTFEYQNIPEQLESELHRLLEGLERRREYETDHQFYLCE
QCGIRFEFEEAMDVNFECPDCGSSLQSMENTALVDAMDGRIDELRAELNVERVA
NT seq 525 nt   +upstreamnt  +downstreamnt
atggcttttgacggtctcctggaagaccccgtcatccagaagtacctccacgaactcgtg
ggcccgacgggcatgccggtcgccgctgcaccgccagacggcgaggtgaccgacgaggaa
ctcgccgagacactcgatctggagttgaacgacgtccgccgggcgctgttcatcctctac
gagaacgaccttgcgagttaccgccggttgcgcgacgaggactcggggtggctgacctac
ctctggacgttcgaataccagaacatccccgaacagctggaatcggaactccaccgcctg
ctggagggactcgaacgccgtcgggagtacgagaccgaccaccagttctacctgtgtgag
cagtgtgggatccgcttcgagttcgaggaggcgatggacgtgaacttcgagtgtcccgac
tgtgggagttcgctgcagtccatggagaacaccgcgctcgtcgacgcgatggacggccgg
atcgacgagttgcgtgcggaactcaacgtcgagcgggtggcctga

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