KEGG   Halococcoides cellulosivorans: HARCEL1_02435
Entry
HARCEL1_02435     CDS       T05406                                 
Symbol
fen
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
harc  Halococcoides cellulosivorans
Pathway
harc03030  DNA replication
harc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:harc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HARCEL1_02435 (fen)
   03410 Base excision repair
    HARCEL1_02435 (fen)
   03450 Non-homologous end-joining
    HARCEL1_02435 (fen)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:harc03032]
    HARCEL1_02435 (fen)
   03400 DNA repair and recombination proteins [BR:harc03400]
    HARCEL1_02435 (fen)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:harc04147]
    HARCEL1_02435 (fen)
DNA replication proteins [BR:harc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    HARCEL1_02435 (fen)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     HARCEL1_02435 (fen)
DNA repair and recombination proteins [BR:harc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     HARCEL1_02435 (fen)
Exosome [BR:harc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   HARCEL1_02435 (fen)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc Sigma70_r1_1
Other DBs
NCBI-ProteinID: AWB26649
UniProt: A0A2R4WYM6
LinkDB
Position
506185..507165
AA seq 326 aa
MGNADLRDLAVLEPIDPSAMAGATIAIDAHNWLYRYLTTTVRWTNAAAYTTSDGREVAHL
LGTLKGLPTLFEADLTPIFVFDGATVDMKDDEVADRRAARERTEDALEDAREAGDPVEIA
RLDSQRQSLSPEMIETTIELLDHLGVPVVKAPAEGEAQAAHMAATEAVDYVGTEDYDALL
FGAPQTLRRLTSSDDTELMDLKATLDEHAISREQLIDVAILCGTDFNDGVSGYGPVTAVD
AVREHGTLAGVFEAEDVFVEHADRIRDLFLDPPVTDDYSFDTSIDPDLEAARAFCETEWE
IASDELDRPFERIEDTLVQTGLDQWG
NT seq 981 nt   +upstreamnt  +downstreamnt
atgggaaacgccgatctccgcgatctcgccgtcctcgaaccgatcgatccctccgcgatg
gccggcgcgacgatcgcgatcgacgcgcacaactggctgtatcggtatctcacgacgacc
gtccggtggaccaacgcggcggcctacaccaccagcgacggtcgggaagtcgcgcacctc
ctgggcacgctcaagggcctgccgacgctgttcgaggcggatctgacaccgatcttcgtc
ttcgacggcgcgaccgtcgatatgaaagacgacgaagtcgctgaccggcgcgctgcccgc
gagcgcaccgaagacgccctcgaagacgcccgcgaagcgggcgatcccgtcgagatcgcg
cgtctcgattcccagcgtcagagcctctcgcccgagatgatcgagaccacgatcgaactg
ctcgatcacctcggcgttccggtcgtgaaggcccccgcggagggcgaggcccaggccgcc
cacatggccgcgaccgaggccgtcgactacgtcggcaccgaggactacgatgcgctcctc
ttcggcgcaccccagacgctccgccgactcacgtcgagtgacgacaccgaactgatggac
ctcaaggcgacgctcgacgaacacgcgatctcccgcgaacagttgatcgacgtggcgatc
ctctgtggcaccgacttcaacgacggcgtctccggttacggccccgtgacggccgtcgac
gcggtccgcgagcacggcactctcgcgggcgtgttcgaggccgaggacgtgttcgtcgaa
cacgccgaccggattcgcgacctgtttctcgacccgccggtcaccgacgactactcgttc
gatacctcgatcgatccggacctcgaggcggcccgcgcgttctgtgagaccgagtgggag
atcgcgagcgacgaactcgatcggccgttcgagcgcatcgaggacacgctcgtccagacc
ggcctggatcagtgggggtga

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