Halococcoides cellulosivorans: HARCEL1_03995
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Entry
HARCEL1_03995 CDS
T05406
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
harc
Halococcoides cellulosivorans
Pathway
harc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
harc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HARCEL1_03995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
harc03400
]
HARCEL1_03995
Enzymes [BR:
harc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
HARCEL1_03995
DNA repair and recombination proteins [BR:
harc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HARCEL1_03995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AWB26931
UniProt:
A0A2R4WZH8
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All DBs
Position
842714..843544
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AA seq
276 aa
AA seq
DB search
MRIGAHTSIAGGVDNAVDEQREYGGNCGQIFTTSPQVWADPEIEAENAERFRSESATHDV
GPWVVHASYLVNLATPKDDLRERSIDSLQADCDAAATLDIEFVNVHLGAHTGAGEAQGLE
NAASAIDALDVPDGVRLLIETDAGSGTKLGDDFAQLGTVVETTTTDVGVCLDTAHAFAAG
YDLSDASAVDEAVAAFDREIGLDRLECLHLNDSKHDCGTNKDEHAHLGEGLIGEAGIAAV
LTHEALRDKPFVLETPTEDGRGFEWNVERAHELAEG
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattggagcccacacgtcgatcgctggcggcgtcgacaacgccgtcgacgaacag
cgcgagtacggcggcaactgcgggcagatcttcaccacctcgccacaggtctgggccgac
cccgaaatcgaggccgagaacgccgagcgctttcgctcggagtccgcgacccacgacgtc
gggccctgggtggtccacgcctcgtatctcgtcaatctcgcgacgcccaaagacgacctc
cgcgagcggtcgatcgactcgctgcaggccgactgtgacgccgccgcgacgctcgacatc
gagttcgtgaacgtccatctcggcgcccacaccggcgcgggcgaggcccagggccttgag
aacgccgccagtgcgatcgatgccctcgacgtgcccgacggcgttcgcctgttgatcgag
accgacgccggcagcgggacgaaactcggtgacgacttcgcacagctcggcaccgttgtc
gagacgacgaccacggacgtcggcgtctgtctggacacggcgcacgcgtttgcggcgggc
tacgacctgagcgacgcgagcgcggtcgacgaggccgtcgcggcgttcgaccgtgagatc
gggctcgaccgcctggaatgtctccacctcaacgactccaaacacgactgcgggacgaac
aaagacgaacacgctcacctcggagaggggctgatcggtgaggcggggatcgcggcggtt
ctgacacacgaggccctccgcgacaagccgttcgtcctcgaaacgccgaccgaagacggt
cgcgggttcgagtggaacgtcgagcgcgctcacgaactcgcggaggggtag
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