Halococcoides cellulosivorans: HARCEL1_05000
Help
Entry
HARCEL1_05000 CDS
T05406
Name
(GenBank) alpha-amylase
Organism
harc
Halococcoides cellulosivorans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
DUF3459
hDGE_amylase
Neopullulanase-like_C
SusG_C
Motif
Other DBs
NCBI-ProteinID:
AWB27109
UniProt:
A0A2R4X015
LinkDB
All DBs
Position
1039534..1041465
Genome browser
AA seq
643 aa
AA seq
DB search
MHHPGPPRFIAAGETIDLAPRDPDPDATYRWSLTTPDDSAVSVGTDPVEQFTPDVSGTYV
AHLDAPDGTHDQTIHVFGPEASTGLVEGERSGESGSPAYSAPEAADRDPGGRPRVHLDGH
VEDDRVVVHAAALPNPAGEESPADLDVAFLVDDRDSIDRRLLDVDGREIAIPIAAIDDRV
RISASAVGGAGYSVPDAIEIEVSDEAVTIDRPYDPPEWAVDAQIYEIYVRTFPGQDAAAD
GEGHAAGERSVFDAIVDRLDYIQSLGVDTLWLTPVLENDHAPHGYNITDFFAIAEDLGTR
EDYERLIEAAHERDLRVLFDLVCNHTARDHPYYQAAVGDPDSAHHEFYEWRGPGEPETYF
DWEYIANVDFSKLRVRRHMLDAVDEWAPLVDGFRIDMAWAVPDSFWKEVHDRVKALDAEF
LLLDETIPYIPDFQDGCFDMHFDSTTYAALRRVGNGEDADALLGAIDERAEIGFPPHAGF
MLYAENHDESRYIVDCGRESAMAAAGALFTLPGSPLLYAGQEFGQRGKRDDLAWAHADEP
LREFVRSLADVRSTDPALSARADCRRVAYTVADGWPDRVTAFARVTDDAASVVVLNFGED
AATVTVPAAASDHDAVTDERIGTPDGLVVERVAVLPADRSRLD
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgcaccatcccggaccaccgcgattcatcgctgcgggcgagacgatcgacctcgcccca
cgcgatcccgatcccgacgcgacctatcgctggtcgctgacgacgcccgacgactcggcg
gtcagcgtcggcaccgacccggtcgaacagttcacgcccgacgtctcggggacctacgtc
gcccacctcgacgcccccgacggcacgcacgatcagacgatccacgtcttcggccccgag
gccagtacgggcctcgtcgagggcgaacggtcgggcgagtccggatcgcctgcctacagc
gcccccgaagcggccgatcgtgaccccggcggtcgtccgcgcgttcacctcgacgggcac
gtcgaggacgaccgggtcgtcgtccacgccgcggcgctgcccaaccccgcgggcgaggag
tcgcccgccgacctcgacgtggccttcctcgtcgacgatcgcgattcgatcgaccgccgc
ctcctcgacgtcgacgggcgcgagatagcgattccgatcgccgcgatcgacgaccgcgtg
cggatctccgccagcgcagtcggcggcgctggctacagcgtccccgatgcgatcgagatc
gaggtgtcggacgaggcggtcacgatcgaccggccgtacgacccgcccgagtgggccgtc
gacgcccagatctacgagatctacgtccggacgttcccgggccaggacgccgccgcggac
ggcgagggccacgcggcgggcgagcggtcggtgttcgacgcgatcgtcgatcgactcgac
tacatccagtcgctcggcgtcgacaccctctggctcacgcccgtcctggagaacgaccac
gcgccccacggctacaacatcacggacttcttcgcgatcgccgaggatctgggcacgcgc
gaggactacgagcgcctgatcgaggcggcccacgagcgcgatctgcgcgtcctgttcgac
ctggtctgcaatcacaccgcgcgcgatcacccgtactatcaggccgccgtcggcgacccc
gacagcgcccaccacgagttttacgagtggcgtgggccgggcgagccagagacgtacttc
gactgggagtacatcgcgaacgtcgacttctcgaagctgcgcgtccgcagacacatgctc
gacgcggtcgacgagtgggcgccgctggtcgatggcttccgcatcgacatggcgtgggcg
gtgcccgattcgttctggaaggaggtccacgaccgggtgaaagcactcgatgcggagttt
ctcctcctggacgagacgatcccgtacatcccggacttccaggacggctgtttcgacatg
cacttcgactcgacgacctacgccgcgctccggcgggtgggcaacggcgaggacgctgat
gcccttctgggggcgatcgacgagcgcgcggagatcgggttcccgccgcacgcggggttc
atgctgtacgccgagaaccacgacgagtcccgctacatcgtcgactgtggccgcgagtcc
gcgatggcggcggcgggcgcgttgttcaccttgcccgggtcgccactgctgtatgccggc
caggagttcggccagcgcggcaagcgcgacgatctggcgtgggctcacgccgacgaaccg
ctgcgggagttcgtccggtcgctggccgacgttcggagcaccgatcctgccctgtcggcg
cgggcggactgccggcgcgtcgcgtacaccgtcgcggacggctggccggaccgggtcacc
gcgttcgcccgtgtcaccgacgacgcggccagtgtcgtcgtgctcaacttcggtgaggac
gcggcgacggtgacggtcccggcggccgccagcgaccacgatgcggtcaccgacgagcgg
atcggaacgcccgacgggctggtcgtcgagcgggtcgcggtcctgcccgccgatcgatcc
cgcctcgactga
DBGET
integrated database retrieval system
