Halococcoides cellulosivorans: HARCEL1_06400
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Entry
HARCEL1_06400 CDS
T05406
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
harc
Halococcoides cellulosivorans
Brite
KEGG Orthology (KO) [BR:
harc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
harc03400
]
HARCEL1_06400
Enzymes [BR:
harc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HARCEL1_06400
DNA repair and recombination proteins [BR:
harc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HARCEL1_06400
Prokaryotic type
HARCEL1_06400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AWB27357
UniProt:
A0A2R4X0N8
LinkDB
All DBs
Position
complement(1294880..1296271)
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AA seq
463 aa
AA seq
DB search
MRIHWHRDDLRVDDNAALAADDGPFLGLFVFDPELMDYAGAARLRFLYDAVASLRKTYRE
HGGTLLVERGDPRTLVPRLASTHDADLVTWARGHSGLARERDAAVRRALDERGIDREAVE
DDLLQAPGTITTNDGDPYQVFTYFSKKWHDRPVEDPHAAPDADRFVDADGEMPTRDALDL
EPPDAEVPAATERAARDRLATFCDGPIYEYADARDYPAGDGSSRLSPYLAFGLIGPREVY
RETEEARAAAPDGDAEESVFEFQDQLAWREFYRHVLYFEPSVVTENFKEYARPIMWREDS
DGLEAWKHGETGYPIVDAGMRQLLAEGWMHNRVRMIVAAFLTKDLLIDWYEGYQWFRERL
IDHDTANDNGGWQWAASTGTDAQPYFRIFNPTTQCERHDPDGEYVREYVPELREVSTETI
HEWPDLDQSTRDRIDTAYPDPIVDHADARERALATFERARGDE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatccactggcatcgcgacgacctccgagtcgacgacaacgccgcgctcgcggcc
gacgacggaccgttcctggggctgttcgtcttcgatccagaattgatggactacgccggt
gccgcccggctacgcttcctgtacgacgccgtcgcctcgctgcgcaagacctatcgtgaa
cacggcggcacactcctggtcgaacggggcgatccgcggacgctcgtcccccgtctcgcc
tcgacccacgacgccgacctggtgacgtgggccaggggccactccggcctcgcccgcgag
cgtgacgcggccgttcgccgcgcgctggacgagcgtgggatcgaccgcgaggcggtcgaa
gacgacctcctgcaggcccccgggacgatcacgacaaacgacggcgacccctatcaggtg
ttcacctacttctcgaagaagtggcacgatcggccggtcgaagaccctcatgcggcccca
gatgcggaccggttcgtcgatgccgacggggagatgcccactcgtgacgcgctagatctg
gagccccccgacgccgaggtcccggccgcgaccgagcgcgccgctcgcgaccgcctcgcg
acgttctgtgatgggccgatctacgaatacgccgacgcgcgtgactatccggccggggac
ggatcctcacggctctcgccgtatctcgccttcggcctgatcggcccccgggaggtctac
cgggaaaccgaggaggcccgcgcggccgcgcccgacggggacgccgaggagagtgtcttc
gagtttcaggatcaactcgcctggcgggagttctatcggcacgtcctgtatttcgagccg
tcagtcgtcaccgagaacttcaaagaatacgcccgccccatcatgtggcgtgaggactcc
gacggcctggaagcctggaaacacggcgaaacgggctatccgatcgtcgacgcagggatg
cgccaactcctcgccgaggggtggatgcacaatcgcgtgcgcatgatcgtcgccgcgttt
ctcaccaaagacctcctcatcgactggtacgagggctaccagtggttccgcgagcgcctg
atcgaccacgataccgccaacgacaacggtggctggcagtgggcggcctcgacgggaacg
gacgcccagccgtacttccggatcttcaacccgacgacgcagtgtgaacgccacgatcca
gacggcgagtacgtccgcgagtacgtccccgaactccgtgaggtctcgaccgagacgatc
cacgaatggcccgacctggatcagtcgacgcgcgatcggatcgacaccgcgtatcccgac
ccgatcgtcgatcacgctgatgcccgcgagcgtgcgctcgcgacgttcgaacgggcgcgt
ggtgacgagtga
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