Halococcoides cellulosivorans: HARCEL1_07540
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Entry
HARCEL1_07540 CDS
T05406
Name
(GenBank) DNA mismatch repair protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
harc
Halococcoides cellulosivorans
Pathway
harc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
harc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HARCEL1_07540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
harc03400
]
HARCEL1_07540
DNA repair and recombination proteins [BR:
harc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HARCEL1_07540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
HHH_5
AAA_28
AAA_21
IMS_HHH
AAA_22
MutS_III
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AWB27572
UniProt:
A0A2R4X196
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Position
complement(1529117..1530850)
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AA seq
577 aa
AA seq
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MDLESYWGIGPKTSARLREALGADRAREAIEAADVETLTAAGLSAGRVTRILRYAAGGAA
MDLLATRDAREVYKGLLAVIAEYAVSDRAADRVRVLTPLDSRTAIEDRQAAVADARSLWE
GLSEADRDAVLDAFADGGLDGDRATVRTAGALRAIDLSGPAVEALNTLDGAALDEAERAL
AALAGDPSDDRLATLREQRDSVADLAAAPQTTVEAIRDSARAGDVRAAFVDHVVSETGVD
HDRVRSAAEVEATDAHAFVTGALDALRADLRAAVDERLADLRADHEDTLAETEATVERAR
DAVGDLALDLSVARFAAAFDLTAPTITDEAGLAVANARNLDLAAAGATVQPVTYAVGDHD
LPAGRSSSRPPTGDRVAVLTGANSGGKTTLLETLCQVAVLARMGLPVPAEHATVGLVDRI
VFHRRHASFNAGVLETTLENVVPPVTAEGRTLLLVDEFEAITEPGSAADLLNGLVDLTVG
HDAMGVFVTHLADDLAPLPDAARIDGIVAEGLTPDLELAVDYQPRFDSIGQSTPEFIVSR
LVANAGDGHERAGYMALAEAVGSDAVQRTLSDASWSE
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggatctcgaatcgtactgggggatcgggccgaagaccagcgcccgcctccgcgaagca
ctcggggccgatcgggcccgcgaggccatcgaagcggccgacgtcgagacgctcaccgcg
gcgggcctgtcggcgggccgggtgacacgcattctgcgctacgctgcgggcggcgcggcg
atggacttgctcgcgacgcgtgacgctcgcgaggtgtacaaaggattgctcgccgtgatc
gccgaatacgccgtctccgatcgcgccgcggatcgcgtgcgcgtgctcacaccgctggac
tcgcggaccgcgatcgaggaccgccaggccgccgtcgctgacgcccgctcgctgtgggaa
ggcctctcggaggccgatcgcgacgcggtcctcgacgcgttcgccgacggcggactcgac
ggcgaccgcgcgacggtccggaccgccggcgcgctccgcgcgatcgacctctcgggcccg
gcggtcgaggcgctgaatacgctcgacggcgcggccctcgacgaggccgagcgagcgctc
gccgcgctcgcgggcgatcccagcgacgatcgactcgcgaccctgcgggagcagcgggat
tcggtcgccgatctggcggcggcgccccagacgaccgtcgaggcgatccgcgactccgct
cgggcgggcgacgtgcgcgcggcgttcgtcgatcacgtggtgagcgagaccggcgtcgat
cacgaccgcgtgcgatcggcggccgaggtcgaggcgaccgacgcgcatgcgttcgtcacg
ggcgcgctcgacgcgctccgggcggacctgcgcgcggccgtcgacgagcgactcgccgac
cttcgggccgaccacgaggacacgctggccgagaccgaagcgaccgtcgaacgcgcccgg
gacgcagtcggcgatctggcgctcgatctctcggtcgctcgcttcgcggcggcgttcgat
ctgaccgcgccgacaatcaccgacgaggcgggcctggccgtcgcgaacgctcgaaatctg
gacctcgcggcggcgggcgcgacggtccagccggtcacctacgcggtcggtgatcacgat
ctgcccgccggtcggtccagttcacgtccgccgacgggcgatcgcgtcgcggtcctgacc
ggcgcgaacagtggtgggaagacgaccctgctcgaaacgctgtgtcaggtcgccgtgctc
gcgcgcatgggcctgccggtgcccgccgaacacgccaccgtcggcctggtcgatcggatc
gtcttccaccgccggcacgcgagtttcaacgcgggcgtcctggagacgacgctcgaaaac
gtggtcccgccggtgaccgccgagggtcgcacactcctcctggtcgacgagttcgaggcg
atcaccgaacccgggagtgcggcggacctgctcaacggcctcgtcgatttgacggtcggg
cacgacgcaatgggcgtgttcgtcacccacctggccgacgacctcgcgccgctgcccgac
gccgcacggatcgacggcatcgttgccgaagggttgacgccggacctggaactcgcggtc
gattaccagccccgcttcgattcgatcggccagtccaccccggagttcatcgtctcccgc
ctcgtcgcgaacgcgggcgacggccacgagcgcgcgggctacatggcgctcgcggaggcc
gtcggcagcgacgccgtccagcggacgctctcggacgcgtcctggtcggagtag
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