Halococcoides cellulosivorans: HARCEL1_07830
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Entry
HARCEL1_07830 CDS
T05406
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
harc
Halococcoides cellulosivorans
Pathway
harc03022
Basal transcription factors
harc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
harc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HARCEL1_07830
09124 Replication and repair
03420 Nucleotide excision repair
HARCEL1_07830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
harc03021
]
HARCEL1_07830
03400 DNA repair and recombination proteins [BR:
harc03400
]
HARCEL1_07830
Enzymes [BR:
harc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HARCEL1_07830
Transcription machinery [BR:
harc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HARCEL1_07830
DNA repair and recombination proteins [BR:
harc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HARCEL1_07830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
ERCC3_RAD25_C
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
MarR_2
AAA
DUF7342
AAA_30
AAA_25
SWI2_SNF2
AAA_28
AAA_5
AAA_11
SLFN-g3_helicase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AWB27624
UniProt:
A0A2R4X1E7
LinkDB
All DBs
Position
1588473..1590359
Genome browser
AA seq
628 aa
AA seq
DB search
MTRRRVSARIPDRKAICPGDATRRVSEEPSVDLDPDAITEIATALGRAVLTADAVADHLG
VSQAVASDALDRAVERAFLDATRVEDTRVYVPADLLGRVKQERIVTFPDRREIVVDQPDQ
FTRAQLSQFARLADVNGSGGYRYEITSADVWAAPVDDADALVASVRRVLGGLDETLESWL
RSQYERAHRFRLRTHDDGYVVLESDAADLMGNVARQQLDDHLRAELSDTESWVAEERVAD
LKRTLYEAGYPVQDDRDLEAGDPVAVDLNVDLRDYQQTWVDAFLDQGAGVLVGPPGSGKT
VAAIAILAAIGGESLILAPGRELLEQWREELLARTDLDDSQIGLYHGDAKQRRPITIATY
RTAAMDRHRHLFDDREWGLIVYDECHHVPADALRRSTTLQTRHRLGLTATPVRESDDERE
IFSLIGPPIGTDWEALFDRGFVARPTVEIRYVEWDRDDRDAYVASEGQERRQLAASNSAK
IDEIEHILAANPAATALIFADYLDQGAAIAERLDVPFCSGETPHHRRQALLEDVREGRRD
RLVLSRVGDEGIDLPAADLAIVASGLGGSRRQGAQRAGRTMRPTGGARMVVLATRGTREE
EFARNRTRHLAGKGVPVTERDAVTTVEE
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atcacccgacggcgcgtgtcggcccgcatccccgaccgaaaggcgatttgtcccggcgac
gctacccgacgtgtgtccgaggagccctctgtcgacctcgatcccgacgccatcaccgag
atcgcgaccgcgctcggccgggccgtcctgactgccgacgcggtcgccgaccacctcggc
gtctcgcaggccgtcgcgagcgacgcgctcgaccgtgccgtcgagcgcgcgttcctcgac
gcgactcgcgtcgaggacacgcgcgtctacgtccccgccgacctgctgggtcgcgtaaag
caagagcggatcgtcaccttccccgaccgtcgggagatcgtcgtcgatcagcccgaccag
ttcacacgtgcgcaattgtcccagttcgcccgtctcgccgacgtgaacgggtcgggtggc
tatcgctacgagatcacgtccgcggacgtctgggccgcgccggtcgacgacgccgacgcg
ctggtcgcgagcgtccggcgcgtcctcggtggcctcgacgagacgctcgaatcctggctc
agatcgcagtacgagcgcgcacatcggttccgactccgcacccacgacgacggctacgtc
gtcctcgaaagcgacgcggccgatctgatgggcaacgtcgcccgccaacagctcgacgac
cacctccgggcggagctgtccgacaccgagtcctgggtcgcagaagaacgcgtcgcagac
ctcaaacggacgctgtacgaggcgggctatcccgtccaggacgaccgcgacctggaggcg
ggcgatcccgtcgcggtcgatctgaacgtcgacctgcgggactaccagcagacgtgggtc
gacgcgtttctcgaccagggcgcgggcgtgctcgtcggcccgcccggcagcggcaagacc
gtcgccgccatcgcgatcctcgcagcgatcggtggcgagtcgctgatcctcgcgcccggg
cgcgaactgctcgaacagtggcgcgaggaactgctcgcccggacggacctcgacgactca
cagatcggcctgtaccacggcgacgccaaacagcgccgcccgatcacgatcgcgacctac
cgcacggccgcgatggaccggcatcgacacctgttcgacgaccgcgagtgggggctgatc
gtctacgacgagtgccaccacgtccctgccgacgcgctccggcgttcgacgaccttacag
acccgtcaccgtctcggcctgaccgcgacgcccgtccgggagtccgacgacgagcgcgag
atcttctcactgatcggcccgccgatcggcaccgactgggaggcgctgttcgatcgaggc
ttcgtcgcgcgcccgaccgtcgagatccgctacgtcgagtgggatcgcgacgatcgcgac
gcctacgtcgccagcgagggccaggaacgccgtcagttggccgcgagcaacagtgcgaag
atcgacgagatcgagcatattctcgccgcgaaccccgcggctacggcgctgatcttcgcg
gactatctcgatcagggcgcggccatcgcagagcgactcgacgtgcccttctgtagcggc
gagacgccccaccatcggcggcaggccttgctcgaagacgtccgggagggccgccgcgac
cgactcgtgctctcccgggtgggcgacgaggggatcgacctgccggcagcggatctcgcg
atcgtcgcgtccggcctcggtgggtcacgccggcagggcgcccagcgcgcgggtcggacg
atgcggcccacgggtggcgcacgcatggtcgtcctcgcgacgcggggcacgcgcgaggaa
gagttcgcgcggaatcgcacgcggcacctcgcgggcaagggcgtacccgtcaccgaacgc
gacgcggtgacgaccgtcgaggagtga
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