Halococcoides cellulosivorans: HARCEL1_09235
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Entry
HARCEL1_09235 CDS
T05406
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
harc
Halococcoides cellulosivorans
Brite
KEGG Orthology (KO) [BR:
harc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
harc03032
]
HARCEL1_09235
03400 DNA repair and recombination proteins [BR:
harc03400
]
HARCEL1_09235
Enzymes [BR:
harc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HARCEL1_09235
DNA replication proteins [BR:
harc03032
]
Prokaryotic type
DNA Topoisomerases
HARCEL1_09235
DNA repair and recombination proteins [BR:
harc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HARCEL1_09235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
HHH
DNA_pol_lambd_f
Cdd1
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
AWB27884
UniProt:
A0A2R4X271
LinkDB
All DBs
Position
1867098..1869593
Genome browser
AA seq
831 aa
AA seq
DB search
MRLIVTEKDNAAERLAAILSDGRASVERRGDVPVRTWGDSSVIGLSGHVVEVDFPPEYGE
WRDVEPVELIDTDVMTRPTREDIVGTLQTLASDADDIVIATDYDREGELIGKEAHDLVRD
VTDAPIERVRFSSITEGEVREAFETPDSLDFDLAAAGEARQIIDLVWGAALTRFLSLAAG
QLGEDFISVGRVQSPTLKLLVDREREIEAFDPDDYWEICTDLDVEGTALEAQYFYDDEGS
EAERIWDADRAAQVVEALRTADSAAITTVRRRTRTDRPPAPFDTTAFISAAGSLGYSAQR
AMSIAEELYTEGYLSYPRTDNTVYPDDLDARERIADFEGTAFDESVERLLAREEIDPTRG
DTESTDHPPIHPTGELPDRGDIGEDAWELYELVVRRFFATCAGPAEWEHLRIVATATGDE
DHQLKATGKRLLEEGYHAVYPYSGASEHHLPDLDEGQRVAIEGVDLQTKQTQPPRRFGQS
RLIERMADQNLGTKATRHNIIEKLYDRGYVENDPPVPTALARAVVSAAEDHAEPIVTAAM
TAELERDMTAIADGESSLDAVTDESREMLHEVFDALHESREAIADELRSSLKDDRRLGPC
PECGESLLIRRSRQGSYFVGCDGYPDCEFTLPLPDAGEPVTIEESCTDHDLAHVKLLDGR
DTRVHGCPLCHAETAAESEDRVIGPCPECGETHGGELAIKRLRSGSRLVGCTRYPDCEYS
VPVPRRGEIAIDDEDRCEIHDLPAIAIVSDDDDDPWELGCPICNFEAYQAEQAPDELEDL
NGVGPATADKLASEGVESPDDLVELDAEGLAEAVSGVSADQVREWQAELGV
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgatcgtcaccgagaaagacaacgccgccgagcgcctcgctgcgatcctcagc
gacgggcgcgcgtcggtcgagcgccgcggcgacgtccccgtccggacgtggggcgacagt
agcgtgatcgggctctcgggtcacgtcgtcgaggtggacttcccgcccgagtacggcgag
tggcgcgacgtcgagcccgtcgagttgatcgacaccgacgtgatgactcgcccgacccgc
gaggacatcgtggggacgctccagacgctcgcgagtgacgccgacgacatcgtcatcgcg
accgactacgatcgcgaaggtgagctcatcgggaaggaggcccacgacctcgtccgcgac
gtgaccgacgcgccgatcgagcgcgttcgcttctcctcgatcaccgaaggcgaggtccgc
gaggcgttcgagacgcccgattcgctggatttcgatctcgcagcggcgggcgaggcccgc
cagatcatcgatctggtgtggggcgcggcgctgacgcggtttctctcgctggcggcgggc
cagttgggcgaggatttcatctcggtcgggcgcgtccagagcccgacgctcaagctcttg
gtcgatcgcgagcgcgagatcgaggcgttcgatcccgacgactactgggagatctgcacc
gatctggacgtcgagggcaccgccctcgaagcccagtacttctacgacgacgagggcagc
gaggccgagcggatctgggacgccgatcgcgccgcacaggtcgtggaggcgctccggacg
gcagacagcgcggcgatcacgaccgtccgccggcgcacccgcaccgatcgcccgcccgcg
ccgttcgacacgacggccttcatttcggcggcgggatcgctgggctactccgcccagcgc
gcgatgtcgatcgccgaagagctgtacaccgaggggtatctgagctacccgcggaccgac
aacacggtctatcccgacgatctggacgcgcgcgagcgcatcgccgatttcgaggggacg
gcgttcgacgagtcggtcgagcgcctgctcgcccgcgaggagatcgatccgacgcgtggc
gacaccgagtcgaccgaccacccgccgatccacccgaccggcgaactgcccgatcgtggc
gacatcggcgaggacgcctgggagctgtacgaactcgtcgtgcggcgctttttcgcgacg
tgtgcggggcccgccgaatgggagcacctccggatcgtcgcgaccgcgaccggcgacgaa
gaccaccagttgaaggcgacgggcaagcgcctgctcgaagagggctatcacgcggtctac
ccgtattcgggggcgagcgagcaccatctccccgacctcgacgaagggcaacgcgtcgcg
atcgaaggggtcgatctccagaccaaacagacccagccgccgcgccggttcggccagtcg
cggctgatcgagcgcatggccgaccagaacctcgggacgaaggcgacccggcacaacatc
atcgagaagctgtacgaccggggctacgtcgagaacgacccgcccgtgccgaccgcgctc
gcccgcgcggtcgtcagcgccgccgaagatcacgccgagccgatcgtcaccgccgcgatg
actgccgaactggagcgggacatgaccgcgatcgcagacggcgagagcagtctcgacgcc
gtcaccgacgagtcccgcgagatgctgcacgaagtgttcgatgcactccacgagtctcgg
gaggcgatcgcggacgaactccgatcgtcgctcaaagacgaccgccgactcggcccgtgt
ccggagtgtggcgaatcactcctgatccgccggagtcgacagggctcgtatttcgtcggc
tgtgacggctatcccgactgtgagttcaccctgccgctgcccgatgcgggcgagccagtc
acgatcgaggagtcgtgtacggatcacgacctcgcccacgtcaaactgctcgacggccgg
gacacccgcgtccacggctgtccattgtgtcacgccgagaccgccgccgagagtgaagac
cgcgtgatcgggccctgtccggagtgtggcgagacccacggcggcgaactcgcgatcaag
cgcctccgctcggggtcacgactggtcggctgtacacgctatcccgactgtgagtactcc
gtccccgtgccccgccgtggggagatcgcgatcgacgacgaggatcggtgtgagatccac
gacttgcccgcgatcgcgatcgtgagcgacgatgacgacgatccgtgggagttgggctgt
ccgatctgtaatttcgaggcctaccaggccgagcaggcccccgacgagttggaagatctg
aacggcgtcgggccggcgaccgccgacaaactcgcgtcggagggcgtcgagtcgccggac
gacctcgtggagctggacgccgagggcctcgccgaggcggtcagcggcgtcagcgccgat
caagttcgggagtggcaggccgaactcggtgtgtga
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