Halococcoides cellulosivorans: HARCEL1_09260
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Entry
HARCEL1_09260 CDS
T05406
Name
(GenBank) DNA-directed RNA polymerase subunit B''
KO
K03045
DNA-directed RNA polymerase subunit B" [EC:
2.7.7.6
]
Organism
harc
Halococcoides cellulosivorans
Pathway
harc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
harc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HARCEL1_09260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
harc03021
]
HARCEL1_09260
Enzymes [BR:
harc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HARCEL1_09260
Transcription machinery [BR:
harc03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
HARCEL1_09260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
Motif
Other DBs
NCBI-ProteinID:
AWB27887
UniProt:
A0A2R4X270
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All DBs
Position
1871011..1872570
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AA seq
519 aa
AA seq
DB search
MDQHDRRTISREYFSRERLADHHFRSFNGFLDRGMQEVVDEKATIDTDIGDKEGEEPVWV
ELGDVRIVTPRVREADGSEELLYPQEARLRNITYAAPVFMEMAIVKGGEEEEERVVDQTE
TKVGQMPVMVGSNKCNIAGFNREELIDIGEDPADPGGYFLVNGSERVLMTSEDLAPNKIL
AEYDTKYGDEIQVAKTFSQRRGYRALVLVERNREGLLEISFPSVSGSVDFVTLVRALGLE
SDEEIVHRVSDDPEIVKFMLENLEAADVHSTEEAIETLGQRVAAGQGKNYQLKRANYVID
RYLLPHLHEEGVDDEEVRINKAFYLCRMAEACFELALNRRDSDDKDHYANKRLKVSGDLM
RDLFRTALNKLARDVKYQLERANMRNRNLSVSTVVRSDVLTERLEHPLATGNWVGGRSGV
SQLVDRTDFMGVLSHLRRLRSPLSRSQPHFEARDLHATQWGRICPSETPEGPNCGLVKNF
AQAMELSQHVEDEKPLKRTLSEMGVEGVPGVTDDMPADD
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggatcaacacgaccgccgcacgatctcacgggagtacttctcgcgggaacgactcgca
gaccatcacttccggtcgttcaacggcttcctcgaccggggcatgcaggaggtcgtcgac
gagaaggcgaccatcgacaccgacatcggtgacaaggaaggcgaagagcccgtctgggtc
gaactcggtgacgtacgcatcgtcaccccgcgcgtgcgagaggccgacgggagcgaggaa
ctgctctacccccaggaggcccgtctgcggaacatcacctacgccgccccggtgttcatg
gagatggcgatcgtcaagggcggcgaagaggaagaggaacgcgtcgtcgaccagaccgag
accaaggtgggccagatgcccgtcatggtcgggtcgaacaagtgcaacatcgcggggttc
aatcgcgaggaactgatcgacatcggcgaagaccccgccgacccgggcgggtacttcctg
gtcaacggctccgagcgcgtcctgatgaccagcgaagacctcgcgcccaacaagatcctc
gcggagtacgacacgaagtacggtgacgagatccaggtcgcgaagacgttctcccagcgg
cgggggtaccgtgcgctcgtcctggtcgagcgcaaccgtgagggactgctcgaaatttcg
ttcccctcggtctcggggagtgtcgatttcgtcacgctcgtgcgcgcgctcggcctcgaa
agcgacgaggagatcgtccaccgcgtgagcgacgaccccgagatcgtgaagttcatgctc
gaaaacctggaggccgccgacgtccactccaccgaggaggccatcgagacgctcgggcag
cgcgtcgccgccgggcagggcaaaaactaccagctcaaacgcgcgaactacgtcatcgac
cggtatctcctgccccacctccacgaagagggcgtcgacgacgaggaggtccggatcaac
aaggcgttctatctctgccggatggccgaggcgtgtttcgaactcgcactcaatcgacgg
gattccgacgacaaagaccactacgccaacaagcgcctgaaggtctctggcgatctgatg
cgcgacctgttccggaccgcgctaaacaagctcgcccgcgacgtgaaataccagctcgaa
cgggcgaacatgcggaatcgcaacctctcggtctcgacggtcgttcgctcggacgtcctg
accgaacggctcgaacacccgctcgcgacgggcaactgggtcggcggtcgatccggagtc
tctcagctcgtcgaccggacggacttcatgggtgtactcagccacctccgccgactgcgc
tcgccgctcagccggtcacagccacacttcgaggcccgcgacctccacgccacgcagtgg
ggtcggatctgtccctccgagacgcccgaagggccgaactgtgggctggtgaagaacttc
gcgcaggcgatggagctctcccagcacgtcgaggacgagaagccgctcaagcggactctc
tcggagatgggcgtcgagggcgtccccggcgtgaccgacgacatgccagcagacgactga
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