Halococcoides cellulosivorans: HARCEL1_09265
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Entry
HARCEL1_09265 CDS
T05406
Symbol
rpoA1
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
harc
Halococcoides cellulosivorans
Pathway
harc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
harc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HARCEL1_09265 (rpoA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
harc03021
]
HARCEL1_09265 (rpoA1)
Enzymes [BR:
harc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HARCEL1_09265 (rpoA1)
Transcription machinery [BR:
harc03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
HARCEL1_09265 (rpoA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
HTH_3
HTH_31
HTH_26
MnmE_helical
HTH_19
Motif
Other DBs
NCBI-ProteinID:
AWB27888
UniProt:
A0A2R4X275
LinkDB
All DBs
Position
1872683..1875634
Genome browser
AA seq
983 aa
AA seq
DB search
MSTGHSPQEIGSISFGLMDPEEYRDMSATKVITADTYDDDGFPIDMGLMDPRLGVIDPGL
ECKTCGKHSGSCNGHFGHIELAAPVIHVGFAKLIRRLLRGTCPECSRLSLTEDEREDYRE
NLKRTKALDGDPTDVMKAGIRDARSRDRCPFCGTPQNDIKHEKPTTYYEVIDVPHEEYPD
RVVEAMEGGEDRERTTPEDLAEETGIELSRINDIISGDFRPSVDQLGAIADAIGVNRTTF
LEEDMDKLMPSDIRDWFEEIPDEDLEVLGISSELSRPEWMILTVLPVPPVTARPSITLDN
GQRSEDDLTHKLVDIIRINQRFMENREAGAPQLIIEDLWELLQYHVTTFMDNEISGTPPA
RHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSARTVISPDPTLSLNEVGVPDRVASEM
TQTMNVNERNLAQARQYVANGPENHPGANYVRRPDGRRLKVTEKNCEELAEKVEAGWEVA
RHLVDGDIVMFNRQPSLHRMSIMAHEVVVMPYKTFRLNTTVCPPYNADFDGDEMNMHALQ
NEEARAEARVLMRVQEQILSPRFGENIIGAIQDHISGLYLLTHENPRFNETQSLDLLRTT
QVDELPEPDGYRDRPSAHRDGDAVDDRAPYWTGRSIFSELLPDDLDLEFTSSAGDTVVID
DGQLLEGTIDEDAVGGFGGDIVDTIAKAYDMTAARMFINEVSSLAVRTIMHFGFSIGIDD
ESIPEAATAQIDEAIDNAEERVQELIETYRQGDLESLPGRTVDETLEMKVMQTLGKARDS
AGDIAEDHFSDDNPAVVMAESGARGSMLNLTQMAACVGQQAVRGERINRGYEGRTLSHFK
ADDLSSEAHGFVEHSYREGLGPREFFFHAMGGREGLVDTAVRTSKSGYLQRRLINALSEL
ETQYDGTVRDTGDKIVQFEFGEDGTSPVTVSSSADNDIDVESIAQRVLDKEFDSDAERDE
FFGRTEQPTNLSEHADDRWQQQA
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgggccattccccccaggaaatcgggtcgatcagcttcgggctgatggacccc
gaggagtatcgcgacatgagtgccacgaaggtcatcaccgccgacacctacgacgacgac
gggttccccatcgacatggggctgatggacccccgactcggcgtcatcgaccccgggctg
gagtgtaagacctgcggcaagcattccgggtcgtgtaacggccacttcggtcacatcgaa
ctcgccgcaccggtgatccacgtcgggttcgcgaagttgatccgacgcctgctccggggc
acctgtcccgagtgctcgcggctgagcctcaccgaagacgagcgcgaggactaccgcgag
aatctgaagcgcacgaaagccctcgacggcgatccgaccgacgtgatgaaagccgggatt
cgcgacgcgcgcagtcgcgaccggtgtccgttctgtggcacgccccagaacgacatcaaa
cacgagaagccgaccacctactacgaggtcatcgacgtcccccacgaggagtaccccgac
cgggtcgtcgaggcgatggaaggcggcgaggaccgcgagcgcacgacgcccgaggacctc
gccgaggagaccgggatcgaactgagccggatcaacgacatcatctcgggtgacttccgc
ccgagcgtcgaccagctcggggcgatcgccgacgcgatcggcgtcaaccggacgacgttc
ctcgaagaggacatggacaagctgatgccctcggatatccgggactggttcgaggagatc
cccgacgaggacctcgaagtgctggggatcagctccgaactgtcgcggcccgagtggatg
attctcaccgtcctgccggtcccgccggtgacggcccgcccgtcgattaccctcgacaac
gggcaacgcagcgaggacgacctgacacacaagctggtggacatcatccggatcaaccag
cggttcatggagaaccgcgaggccggtgcgccccagctgatcatcgaagacctctgggaa
ctgctgcagtaccacgtcacgacgttcatggacaacgagatttcggggacgccgccggcc
cgccaccgctcggggcggccgctgaagaccctctcccagcgcctgaaaggcaaggagggt
cgcttccgagggtcgctgtcgggcaagcgtgtgaacttctccgcgcggacggtcatctcg
ccggacccgaccctctcgctcaacgaggtcggcgtccccgaccgcgtcgccagcgagatg
acacagacgatgaacgtcaacgagcggaatctcgcccaggcccgccagtacgtcgccaac
gggcccgaaaaccatcccggcgcgaactacgtccgccggcccgacggacgccgactgaaa
gtcaccgagaagaactgcgaggaactcgcagagaaggtcgaggctggctgggaggtcgct
cgccacctcgtcgacggcgacatcgtgatgttcaaccgtcagccgtcgctgcaccggatg
tcgatcatggctcacgaggtcgtggtcatgccctacaagacgttccgcttgaacacgacg
gtctgtccgccgtacaacgctgacttcgacggcgacgagatgaacatgcacgccctccag
aacgaggaggcacgtgccgaagcacgggtcctgatgcgcgtgcaagaacagatcctctcg
ccgcgcttcggggagaacatcatcggggcgattcaggaccacatctcgggactgtatctg
ctgacccacgagaacccccggttcaacgagacccagtcgctggacttgctgcggacgacc
caggtcgacgaactgcccgaaccggacgggtatcgcgacaggccgtcggcgcatcgagac
ggcgacgccgtcgacgacagggcgccctactggaccggccgatcgatcttctcggagttg
ctcccggacgatctcgacctcgaattcacgtcttcggcgggcgacacggtcgtcatcgac
gacggccaactcctggaggggacgatcgacgaggacgccgtcggtgggttcggtggcgac
atcgtcgacaccatcgcgaaagcctacgacatgacggccgcacggatgttcatcaacgag
gtctcctcgctcgcggtccgaacgatcatgcacttcgggttctcgatcgggatcgacgac
gagtcgattcccgaggccgcgacggctcagatcgacgaggcgatcgacaacgccgaagag
cgcgtccaggaactcatcgagacataccgacagggcgacctggagagtctgccgggccgc
accgtcgacgagaccctggagatgaaggtcatgcagacgctcggcaaggcccgtgactct
gcgggtgacatcgccgaagaccacttctccgacgacaaccccgcggtcgtgatggccgag
tccggggcgcgtgggtcgatgctgaacctgactcagatggccgcctgtgtcggccagcag
gccgtccgtggcgagcggatcaaccgtggctacgaggggcggacgctcagtcacttcaag
gccgacgacctctcctcggaggcccacgggttcgtcgagcactcctaccgcgagggcctc
ggcccgcgggagtttttcttccacgcgatggggggccgggagggcctggtcgacacggcc
gtccgaacgtcgaagtcgggctacctccagcgtcgcctgatcaacgcgctctcggaactc
gaaacccagtacgacggcaccgtccgggacaccggcgacaagatcgtccagttcgagttc
ggcgaggacggcaccagtccggtgacggtctcctcgtcggccgacaacgacatcgacgtc
gagtcgatcgcccagcgcgtcctcgacaaagagttcgacagcgacgccgagcgcgacgag
ttcttcgggcgcactgaacagccgaccaacctctccgaacacgccgacgaccgctggcaa
cagcaggcctga
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