Halococcoides cellulosivorans: HARCEL1_09730
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Entry
HARCEL1_09730 CDS
T05406
Name
(GenBank) replication factor A
KO
K07466
replication factor A1
Organism
harc
Halococcoides cellulosivorans
Pathway
harc03030
DNA replication
harc03420
Nucleotide excision repair
harc03430
Mismatch repair
harc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
harc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HARCEL1_09730
03420 Nucleotide excision repair
HARCEL1_09730
03430 Mismatch repair
HARCEL1_09730
03440 Homologous recombination
HARCEL1_09730
03460 Fanconi anemia pathway
HARCEL1_09730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
harc03000
]
HARCEL1_09730
03032 DNA replication proteins [BR:
harc03032
]
HARCEL1_09730
03400 DNA repair and recombination proteins [BR:
harc03400
]
HARCEL1_09730
Transcription factors [BR:
harc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
HARCEL1_09730
DNA replication proteins [BR:
harc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
HARCEL1_09730
DNA repair and recombination proteins [BR:
harc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
HARCEL1_09730
MMR (mismatch excision repair)
HARCEL1_09730
DSBR (double strand breaks repair)
HR (homologous recombination)
HARCEL1_09730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
Ssb-like_OB
SHLD2_OB1
Motif
Other DBs
NCBI-ProteinID:
AWB27967
UniProt:
A0A2R4X2E5
LinkDB
All DBs
Position
complement(1951438..1952886)
Genome browser
AA seq
482 aa
AA seq
DB search
MGAIEEVHADLDAEVSEEDFREAVEAKVEQMGGLADERTAAMLVAHELEDGEVEAVADLE
AGMDEVELPLKVCSIGEIRTFERDDEEGEGQVINVRAADETGGVRLAFWDGRATAVADGE
IEVGDVIMVRGRPKEGYDGLEISVSKAQVDEETEIDVDPDGEETIDALRMGQSDVTVQGQ
VLSVGEVRTFDRDDGSEGRVANLAIGDETGRIRVTLWGDRTAAVETVAPGETIAVIDGYV
RERDGGLELQIGDRGAVETVDEEVTFDPDATPIDSVEIGTTVDLAGVVRSTDPIRTFDRD
DGSEGQVKNVRLQDESGDIRVALWGDHADTDVGPGEKLYCGDVEIQDGWQDDLEASAGWQ
STVAVLDGSVSAGAGGSTGETASASAESSRTRGGSDTGGTLAAYADDESGGSTATTDADT
ETADAAETTEYTGTVVQTGDPVILDDGQETVTVATDADLHLGEEITVRGPRTEDHIDAED
VF
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgatcgaagaggtccacgcagatctcgacgcagaggtctccgaagaggacttt
cgggaggccgtcgaggccaaagtcgagcagatgggtgggctcgcggacgagcgcacggcg
gcgatgttggtcgcccacgaactcgaagacggcgaagtcgaggcggtcgcggacctcgaa
gcgggcatggacgaggtcgagttgccactcaaggtctgctcgatcggcgagatccgcacc
ttcgagcgcgacgacgaggagggcgagggccaggtgatcaacgtccgcgcggccgacgag
accggcggcgttcgactggcgttctgggacggccgcgcgacggcggtcgcggacggtgag
atcgaggtcggtgacgtgatcatggtgcgcggtcgcccgaaagagggctacgacggcctg
gagatcagcgtctcgaaagcccaggtcgacgaggagaccgaaatcgacgtcgaccccgac
ggcgaagagacgatcgacgcgctgcggatgggtcagtccgacgtcaccgtccagggacag
gtcctctcggtcggggaggtccgcacgttcgatcgagacgacggctcggaaggccgggtc
gcgaacctcgcgatcggtgacgagaccggccgcattcgggtgacgctgtggggcgatcgc
accgcggccgtcgagacggtcgctccgggcgagacgatcgcggtgatcgacgggtacgtc
cgcgagcgcgacggtgggctcgaactccagatcggtgaccgcggtgcggtcgagaccgtc
gacgaggaggtcaccttcgaccccgatgcgacgccgatcgactccgtcgagatcggcacg
accgtcgatctggcgggtgtcgtccgctcgaccgacccgatccgcacgttcgatcgggac
gacggctcggagggccaggtgaaaaacgtccgcctgcaggacgagtcgggcgacatccgg
gtcgcgctctggggcgaccacgccgacaccgacgtcggcccgggcgagaagctgtactgc
ggcgacgtcgagatccaggacggctggcaggacgacctcgaagcgtcggcggggtggcag
tcgacggtcgcggtgctcgacgggtcggtgagcgccggcgctggtgggtcgactggcgag
accgcgagcgccagtgcagagtcctctcgcacgcgcgggggcagcgacaccggggggacg
ctcgccgcctacgccgacgacgagtccggggggtcgactgcgacgacggacgcagacacc
gagacggctgacgctgccgagacgaccgagtacaccgggacggtcgtccagacgggcgat
ccggtgatcctcgacgacggccaggagacggtcacggtcgcgaccgacgcggacctccat
ctcggtgaagagataaccgttcgggggccccgcaccgaggatcacatcgacgccgaggac
gtgttctag
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