Halococcoides cellulosivorans: HARCEL1_10415
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Entry
HARCEL1_10415 CDS
T05406
Symbol
prf1
Name
(GenBank) peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
harc
Halococcoides cellulosivorans
Pathway
harc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
harc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HARCEL1_10415 (prf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
harc03019
]
HARCEL1_10415 (prf1)
03012 Translation factors [BR:
harc03012
]
HARCEL1_10415 (prf1)
Messenger RNA biogenesis [BR:
harc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
HARCEL1_10415 (prf1)
Translation factors [BR:
harc03012
]
Eukaryotic type
Release factors
HARCEL1_10415 (prf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
ZnF_RZ-type
Zn_Ribbon_TF
DUF2321
PWP3A-B_C
Motif
Other DBs
NCBI-ProteinID:
AWB28089
UniProt:
A0A2R4X2P8
LinkDB
All DBs
Position
complement(2093118..2094368)
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AA seq
416 aa
AA seq
DB search
MSDSSSGQSDRQDYEFQKVIEELEDYRGSGTQLVTIYIPDDTQVSEVVAHVTQEHSEAAN
IKSKQTRTNVQDALKSIKDRLRYYDTYPPENGLVLFSGAVDAGGGRSDMITRVLESPPDP
IQSFRYHCDSEFLTEPLESMLEDKGLFGLIVLDRREANVGWLRGKRIDPVKSATSLVPGK
QRKGGQSAQRFARLRLEAIDNFYQEVAGMADELFVPKRGEIDGILVGGPSPTKDDFLSGD
YLHHELQDLVLGKFDVSYTDESGLSELVDAAEDVLDEYEVLQDKQVMEQFFKELHDGELA
TYGFGPTRQNLNMGAVEQLLISEDLRQEVASYTCPNGHDTYAMLDPNADASDAVCNSCGA
AIDEPDERTDAIDHLMELAEERGTETVFVSTDFEKGDQLLSAFGGVAGILRYDTGI
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattcgtcgtccgggcagtccgatcggcaggactacgagttccagaaggtgatc
gaggaactcgaagactaccgtgggtcgggcacccaactcgtgacgatctacattcccgat
gacacgcaggtgagcgaggtcgtcgcccacgtcacccaggagcacagcgaggccgcgaac
atcaaatccaaacagacgcgcacgaacgtccaggacgcactcaagtcgatcaaggaccgc
ctgcgctactacgacacctacccacccgagaacggtctcgtcctcttctcgggcgcggtc
gacgccggcggcggccgctccgatatgatcacgcgcgtcctggagagtccgcccgacccg
atccagtcctttcgctatcactgtgactcggagtttctgaccgagccactggagagcatg
ctcgaagacaagggcctgttcggcctgatcgtcctcgaccggcgcgaggccaacgtcggg
tggctccgtggcaagcgcatcgaccccgtcaagtcggccacctcgctcgtcccgggcaaa
cagcgaaaggggggtcagtccgcccagcgattcgcccgcctccgcctcgaagcgatcgac
aacttctatcaggaggtcgcggggatggccgacgagttgttcgttcccaagcgcggtgag
atcgacggcatcctcgtgggcgggccctccccgaccaaagacgacttcctctccggcgat
tatctgcaccacgaactccaggatctggtcctcgggaaattcgacgtctcctataccgac
gaatccggcctgtcggaactcgtcgacgccgccgaagacgtcctcgacgagtacgaggtg
ctccaggacaagcaggtcatggagcagttcttcaaggaactgcacgacggcgagttggcg
acctacgggttcggcccgacccgccagaacctcaacatgggcgcggtcgagcagttgctc
atcagcgaggacctccgccaggaggtcgcgagctatacgtgtccgaacggccacgacacc
tacgccatgctcgatccgaacgccgacgcgagcgatgcggtctgtaactcctgtggcgcg
gcgatcgacgagccagacgagcgcaccgacgccatcgaccacctgatggaactggccgaa
gagcgcggcaccgagaccgtgttcgtctcgacggacttcgagaaaggcgaccagttgctc
tcggcgttcggtggtgtcgcggggattttgcgatacgacaccgggatctga
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