Halococcoides cellulosivorans: HARCEL1_10450
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Entry
HARCEL1_10450 CDS
T05406
Name
(GenBank) ribosome biogenesis/translation initiation ATPase RLI
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
harc
Halococcoides cellulosivorans
Brite
KEGG Orthology (KO) [BR:
harc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
harc03009
]
HARCEL1_10450
Ribosome biogenesis [BR:
harc03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
HARCEL1_10450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
Fer4_RLI
AAA_16
AAA_22
AAA
RNA_helicase
NACHT
AAA_23
Rad17
AAA_33
AAA_5
RuvB_N
Fer4
AAA_24
Fer4_10
Fer4_6
Fer4_7
AAA_25
Fer4_9
Fer4_16
Motif
Other DBs
NCBI-ProteinID:
AWB28096
UniProt:
A0A2R4X2S1
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All DBs
Position
2099541..2101385
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AA seq
614 aa
AA seq
DB search
MADDSIAVVDLDRCQPDRCNYECVKDCPPNRTGKECIVRREEAYADRSDREEGDYAGDPD
QVWISEEICLGETCGICVDRCPFDAIQIVNLPQELDEAPIHRYGENSFALYGLPAPRDGQ
VTGILGPNGIGKTTAVRILADELQPNLGQIGDPPAWDAILDEHRGTALQPYLEAIDDEDV
SVARKPQYVDKLPDRYGGRTRDLLERADERGVVDELARRVGIAPVLDQDLDTLSGGELQR
VALIATLARDADFYFLDEITPYLDIGQRMTAARLVRELAESGDRSMLVVEHDLAILDLLA
DGIHLAYGQPGVFGVITPPKSTKQGINEYLAGYLESENVRVRDSEITFETHAPRTLTGGK
PVVEYPALEKSYGEGEFGLSVEAGTIHEGEVLGVVGPNGIGKSTFAQLLAGRLAPDAGSL
DASLDISYKPQYVEIDRQMRVETFLRTITDDVGSSYWTTEIAQPLQLDPIMDQQLPDLSG
GERQRVAIAACLSDDADLYLLDEPSAHLDVEQRVRTTTAIRRYAENHDATALVIDHDIYM
VDLLSDRLLVFDGEPAEHGHASQPQPMREGMNDFLANLDVTFRRDERVGRPRINKPGSQL
DREQKQSGEYYYSE
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgacagcatcgccgtcgtggatctggatcgctgccagcccgatcggtgtaac
tacgagtgtgtcaaagactgcccgccgaatcgcacgggcaaagagtgtatcgtccgtcgc
gaagaggcctacgccgaccggtcggatcgcgaagagggcgattacgcgggcgatcccgac
caggtgtggatctccgaggagatctgtctgggcgagacctgtgggatctgcgtcgatcgc
tgtccgttcgacgcgattcagatcgtcaacctcccccaggaactcgacgaagcgccgatt
caccgctacggcgagaactcctttgcgctgtatggcctgcccgccccgcgcgatggccag
gtgacgggcatcctcggcccgaacggcatcgggaaaacgaccgcggtgcggatcctcgcc
gacgaactccagccgaacctcggccagatcggtgatccgcccgcgtgggacgccatcctc
gacgagcaccgcgggacggcgcttcagccgtacctcgaagcgatcgacgacgaggatgtc
tcggtcgcgcgcaagccacagtacgtcgacaaactgcccgatcgctacggcgggcgcaca
cgtgacctcctcgaacgcgcggacgagcgcggcgtcgtcgacgaactcgcgaggcgtgtc
gggatcgcacccgtgctcgatcaggacctcgacaccctctcgggcggggaactccagcgt
gtcgcactgatcgccacgctcgcccgcgacgccgacttctactttctggacgagatcacg
ccgtatctcgacatcggccagcggatgaccgccgcgcgactcgtccgggaactcgcggag
tcgggcgatcggtcgatgctcgtcgtcgagcacgacctcgccatcctggatctgctcgcc
gacgggatccatctggcctacgggcagccgggcgtgttcggtgtgatcacgccgccgaaa
tcgaccaaacaggggatcaacgagtacctcgcgggctatctcgaatcggagaacgtccgc
gtgcgggactccgagatcaccttcgagacccacgcgccccggacgctcacgggcggcaag
cccgtcgtcgagtaccccgccctggagaaatcctacggcgaaggcgagttcggcctctcg
gtggaagccggaacgatccacgagggcgaagtgctgggcgtcgtcgggccgaacggcatc
gggaaatccacgttcgcgcagttgctcgcgggccgactcgcgcccgatgcggggagcctc
gacgccagcctcgacattagctacaagccccagtacgtcgagatcgaccgccagatgcgc
gtcgagacgttcctccggacgatcaccgacgacgtcgggagttcctactggacgaccgaa
atcgcccagccgctccagctcgatcccatcatggatcagcagctccccgatctgtcgggg
ggcgagcgccagcgcgtcgcgatcgcggcgtgtctctccgacgacgccgatctgtacctg
ctcgacgaaccctccgcgcacctcgacgtcgaacagcgggtgcggacgacgacggcgatc
cgccggtacgccgagaaccacgacgcgaccgcgctcgtcatcgaccacgacatctacatg
gtcgatctgttgagcgatcgcctgctcgtcttcgacggcgaacccgccgagcacggccac
gccagccagccccagccgatgcgcgaggggatgaacgactttttggcgaacctcgacgtg
accttccggcgggacgaacgcgtcggtcgcccacggatcaacaagcccggtagtcaactc
gaccgcgagcaaaaacagtccggcgagtattattacagcgagtaa
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