Halococcoides cellulosivorans: HARCEL1_12040
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Entry
HARCEL1_12040 CDS
T05406
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
harc
Halococcoides cellulosivorans
Brite
KEGG Orthology (KO) [BR:
harc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
harc03400
]
HARCEL1_12040
Enzymes [BR:
harc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
HARCEL1_12040
DNA repair and recombination proteins [BR:
harc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
HARCEL1_12040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AWB28383
UniProt:
A0A2R4X3V2
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All DBs
Position
2464745..2466223
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AA seq
492 aa
AA seq
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MTVWVLGDQLTDRSGPVAGSDSALMIEATAFGRRLPYHPHKLTLVVAAMRSFRDRLRADG
RTVHYYQCETFADGLAAHAAAHPDDHLRAMTPPTHGARDRMAAMADEAGLTIDFEPDPRF
LCAPAAFDEWAGDRDEYRHEAFYRWQRDRTGILIDDGEPVGGEYNYDAQNRETPPADWSP
PAVPTVDTGVHTDAAAEWAAEIGEDWADPATFQWPTTREGALDVLDAFVSDRLEEFGPYQ
DAMRSDSWAMAHSLLSPALNLGLLGPREVIDRVVAAEDAPLASVEGFVRQVLGWREFLRH
VYRREMPALAAANQLDATLDLPPAYWTGETRLACLADVVDGVRERGYAHHIERLMVLSNI
ATLLGVRPQALNRWFHAAFVDAFHWVTTPNVIGMGTFGTDQLSTKPYVTSANYIDEMSDY
CSGCAYDRSATLGADACPLNTLYWDFLDRHEDRLRANHRMGLVYSHLDDRDDREEIRTRA
DRLRSDALDGTI
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtctgggtgctgggcgaccagttgaccgatcgatcggggccggtcgccgggagt
gactcggctctcatgatcgaggcgacggcgttcgggcggcgactgccctatcaccctcac
aaactcaccctggtcgtcgccgcgatgcgatcgttccgtgaccgtctgcgggccgacggt
cgaacggtccactactaccagtgcgagacgttcgcggacggcctggccgcccacgccgcc
gcccacccggacgaccacctccgggcgatgaccccaccgacccacggggcgcgcgaccga
atggccgcgatggccgacgaggcgggcctcacgatcgatttcgagcccgatccacgcttt
ctgtgtgcccccgccgcgttcgacgagtgggcgggcgatcgcgacgagtaccgccacgag
gcgttctatcggtggcagcgcgaccggacgggcattctgatcgacgacggcgagccagtg
ggcggcgagtacaactacgacgcccagaaccgcgagacgccgccggcggactggtcgcca
ccggcggtccccacggtcgacaccggtgtgcacaccgacgcggcggcggagtgggccgcc
gagatcggtgaggactgggccgatcccgcgacgtttcagtggccgacgacccgcgagggg
gcgctcgacgtcctcgacgcgttcgtttcggatcgactggaggagttcggaccctatcag
gatgccatgcgatcggactcgtgggcgatggcccactcgctgctctcgccggcactgaac
ctcggcctgctcgggccacgtgaggtgatcgatcgggtggtcgcggccgaggacgccccg
ctcgcgagcgtcgaggggttcgtccggcaggtgctcggctggcgggagttcctgcgccac
gtctaccgtcgtgagatgccagcgctggccgcggcgaaccagttagatgccacgctcgat
ctgccgccggcgtactggactggcgagacgcgactggcctgtctggccgacgtcgtcgac
ggcgtccgcgaacggggctacgcccaccacatcgagcgattgatggtgctctcgaacatc
gcgacgctgctcggcgtccgcccccaggcgctgaatcgctggtttcacgccgcgttcgtc
gacgccttccactgggtgacgacgccgaacgtgatcggcatgggcacgttcgggaccgac
caactctcgacgaaaccgtacgtgacgagtgcgaactacatcgacgagatgagtgattac
tgttcggggtgtgcgtacgatcggtccgcgacgctcggcgcggacgcctgcccgctgaac
acgctctactgggactttctggaccgccacgaggaccgtcttcgcgcgaaccaccggatg
ggcctggtctactcgcatctggacgaccgcgacgaccgcgaggagatccggacgcgggcc
gaccgcctgcggagcgatgccctcgacggtacgatctga
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