Halococcoides cellulosivorans: HARCEL1_12140
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Entry
HARCEL1_12140 CDS
T05406
Name
(GenBank) helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
harc
Halococcoides cellulosivorans
Brite
KEGG Orthology (KO) [BR:
harc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
harc03400
]
HARCEL1_12140
Enzymes [BR:
harc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HARCEL1_12140
DNA repair and recombination proteins [BR:
harc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HARCEL1_12140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
AAA_16
DEAD
Motif
Other DBs
NCBI-ProteinID:
AWB28398
UniProt:
A0A2R4X3N2
LinkDB
All DBs
Position
complement(2483606..2487247)
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AA seq
1213 aa
AA seq
DB search
MTDAPEEFELTEQQEDALVQGRNVAITAGAGTGKTTALTERYVTILAENPSLTPENLVTI
TFTRKAAAELTERVREEVYDRLEAVESPAAYQRWRAVLDDLEDGYVHTIHAFCTRLLREW
AVEAPVPLGFDVLDEDGAAKLQREAVTEFLEDTQDDEDVKLLAQLWGRDQLIDVFVGLLD
QRPQSEAVLEEWRDADAEEYVDLLWDVVCDLDVADARQTLYADGLLEQVRTVAGRVDHEA
QIADEDGLRAYRTFNEIATTLSVAPEASDPRDCQRAILNLYEACEKKNGGLYSSSGYVVG
DRADWGDYGDVYDDLKSAIDATLAAVEPHADAVETTPGELEANSAPYAVALMRVFDDVLA
AYTAEKERRDSLDFPDVIATTLQFLRSNDAVVDQLREQFAAVMVDEFQDTDPRQWALVKL
LTGVDAQTASNVFLVGDEKQSIYGFRGADVTTFGEARTELETVNDARGVDTVPESDDKSP
TGLELSGNFRTLDAPLTFLNELFGSVFQPDGEDHEPYEARPQSLSTERDLVEDIEGLAGT
VEYLPVPDDAETAATLLGDDHPVADGALDHTLEAEAQALAARLTHLFDDPPTVQDTETEE
HRAATPDDVAILLRRRTHLDRYQRALESYDIPFTVVGGVGFYDTPEIQALTNLLRVLGDP
HDDVSLYGVLRSPLFGLTDDRLAPAVADADSVWEALAEADDSQLSDAYALLTTWRTLCGC
ATPSEDGVRPWNRLLSRVIDETGYLASVSADERGQQAVANVEKFRDQVRTWSENGVRTAA
GLLHRIDRQAETDPREGEADIPGDVEGVRIMTIHSAKGLEFPIVTVPDIGGQLNFGRSVD
DHGYVQLVEGTDDAPPLPAVGGPSPDDAFSIEKTAVHEYAQRQSLPRERAEAKRLLYVAC
TRARDHLLLCGTHEIDVDESGAIGLGEPAAFDEADRWRDWLQPLLLDDDLLDRAHREGVV
RGQLGAASYTVRQPPRPVDWHPDDGTSDPTPEISIPTPPTPTPASRVTATTLVNAVADAG
ESANGSSFEGEVTGLSPTTFGTVVHRLIELRPPRDEWPAFIRRLSRMAGEDPTDTDLHDA
VDHATDAVEFVDQVEADVQLQAVYDEFSVGARIGDSRVVGDIDRLLVTPDAFHIIDYKTN
DLSSKSTTDLADHYRPQMLAYALALFQHDPDRRVRASLRFTDAGIEERLAWDPDESSLIE
SDLRSMVDLVSHH
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgcacccgaggagttcgaactcaccgagcaacaggaggacgcactcgtccag
ggtcggaacgttgcgatcaccgccggcgccgggaccgggaagacgacggcgttgaccgag
cgatacgtgacgatactggccgagaatccgtcgctcacaccggagaacctcgtcacgatc
acgttcacccgaaaggcagcggccgaactgaccgagcgcgtccgggaggaggtgtacgac
cgactcgaagcggtggagtcaccggcagcgtatcagcgctggcgcgctgtccttgacgac
cttgaggacgggtacgtccacacgattcacgcgttctgcactcgccttttacgggagtgg
gccgtcgaggccccggttcccctcgggttcgatgtgctggatgaagacggcgcagcgaaa
ctccagcgggaggccgtgaccgagtttctcgaagacacccaggacgacgaggatgtcaaa
ctcttggcccagctctggggtcgagaccaactgatcgacgtgttcgtgggactgctcgac
caacgcccgcagagcgaggccgtcctcgaggagtggcgtgacgccgacgccgaggagtac
gtcgatctgctctgggacgtcgtctgtgatctcgatgtggccgacgcacgacagacgctg
tatgcggacggcctcctcgagcaggttcgcacagtcgcgggccgcgtggaccacgaggca
cagatcgccgacgaggacgggctccgggcctacaggaccttcaatgagatcgcgacgaca
ctctcggtcgctcccgaagcaagcgatccgcgtgactgccagcgagcgatcctcaacctt
tacgaggcctgtgagaagaaaaacggcgggctgtacagtagttccggatacgtcgttggc
gaccgagctgactggggtgactacggagacgtctacgatgatctcaagagtgccatcgac
gcgactctagcggcggtcgagccccacgcagacgctgtcgagacgacgcccggtgagctc
gaagcgaacagcgctccgtacgcggtggcgctcatgcgtgtcttcgacgatgtgttggcg
gcctacacggcggagaaggagcgccgcgattcccttgatttcccggacgtgatcgcgacg
acgcttcagttcttgcggtcgaacgatgcagtcgttgaccagcttcgagagcagtttgcg
gccgtgatggtcgacgagttccaggacacagacccgcgccagtgggcgctagtcaaactc
ctcacgggcgtcgacgcgcagacggcgtcgaatgtgttcctggtcggtgacgaaaaacag
agcatttacggattccgtggcgctgacgtgacgacgttcggtgaggcgcggacggaactc
gagacggtcaacgacgcccgtggggtcgacaccgtccccgagagcgacgataagagtccg
actgggctcgaactctccgggaactttcggacgctggatgcgccgctcactttcctgaac
gaactctttgggtcggtgttccagccggacggcgaggaccatgaaccgtacgaggcacgc
ccgcagtcgctgtccaccgagcgtgatctggtggaggacatcgagggcttggcggggacc
gtcgagtatctcccagtgcctgatgatgctgagaccgcggcgacgctcctcggagacgac
caccccgtggctgacggagcgctggatcacacactcgaagctgaagcccaggctctcgcc
gcgcggctcacccacctgttcgacgacccgccgacagtgcaggataccgagaccgaggaa
caccgcgcggcaacgccggacgatgtcgccattctccttcgccggcgaacccatctcgac
cggtatcagcgcgcgctcgagagctacgacatccccttcacagtcgtcggtggcgtcggg
ttctacgacacgcccgagatccaggcgctcacgaatctgctccgggtgctcggtgatccc
cacgacgatgtctctctatatggcgtgcttcggtcgccactgttcgggctcaccgatgac
cgtctcgcaccggccgtcgcagacgctgattcggtctgggaggccctcgccgaggccgac
gattcacagctttcagacgcgtacgccctgctcacgacgtggcggacgctttgtggctgt
gcgacgccgtcggaagacggtgtgcgtccgtggaatcggctgctttcgcgtgtgatcgac
gagactggctatctggcgagtgtgagtgccgacgaacgcggccaacaggccgtcgcgaac
gtcgagaagttccgcgatcaggtacgaacttggagcgagaacggcgttcgaacggcggcg
ggactcctccaccgcatcgatcgacaggctgagaccgatccacgagagggagaggccgac
atcccaggggacgtcgagggtgttcgaattatgacgatccattccgcgaaggggctggag
tttccgatcgtcaccgtgccggacatcgggggtcaactcaacttcggccggtccgtcgac
gatcacgggtacgttcagctcgtcgaggggaccgacgacgcgccgccactcccggccgtc
ggcggtcccagtccggacgatgcgttctcgatcgagaagactgccgttcacgagtacgca
cagcgacagtcgctcccacgagagcgagcggaggcgaaacgcctgctctacgtcgcgtgc
acgcgagcgcgcgatcacctcctgctctgtggtacccatgagatcgacgttgacgagtcg
ggggccatcggactcggtgagccggcggcgttcgatgaggccgatcggtggcgtgattgg
cttcaacccctgcttcttgacgacgatctcctcgaccgagcgcatcgggagggggtagtt
cgaggacagcttggggcggctagctacaccgttcgtcagcctcctcggccggtcgactgg
caccccgacgacgggacttcagaccccactccggagatttcgattccgacgccaccgact
ccgacgccagcgagccgagttacagcgacaacgctcgtgaatgcagtcgcggacgccggc
gagagcgccaatggctcctcgttcgagggtgaggtaactggattgagcccgaccacgttc
gggacggtcgtgcatcgcctcatcgaacttcggccgccgcgagacgaatggcctgctttc
attcgtcgcctgagtcggatggctggggaagacccgacagacacagacctccacgatgca
gtcgatcatgcgactgatgcggtcgaatttgtcgaccaggttgaggccgatgttcaactc
caagcggtgtatgacgagttctctgtcggtgcccgtatcggtgattcacgggtcgtcggt
gacatcgaccggctcctggtcacgccggacgccttccatattatcgactacaagacgaac
gacctctcttcgaagtcgacgactgatctcgcagatcattatcgcccgcagatgctcgct
tacgctctggctctcttccagcatgaccccgaccgtagggttcgcgcctcgcttcggttc
accgacgccggtatcgaggaacggctggcatgggatcccgatgagtcctctctgatcgaa
tcggatcttcgttcgatggttgatctggtctcgcaccactga
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