Halococcoides cellulosivorans: HARCEL1_12270
Help
Entry
HARCEL1_12270 CDS
T05406
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
harc
Halococcoides cellulosivorans
Pathway
harc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
harc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HARCEL1_12270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
harc03021
]
HARCEL1_12270
Transcription machinery [BR:
harc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HARCEL1_12270
Prokaryotic type
Archaeal type
TFB
HARCEL1_12270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
HTH_3
DZR
GerE
DUF7129
PHF5
Motif
Other DBs
NCBI-ProteinID:
AWB28421
UniProt:
A0A2R4X3Q0
LinkDB
All DBs
Position
complement(2515200..2516126)
Genome browser
AA seq
308 aa
AA seq
DB search
MATRDIYDTGFDEDIRTDSSANHCPECDGRVSTNAIETLCEDCGLVIQDQRIDHGPEWRA
YDEEDCERTGAPLTAARHDRGLSTEIGRGTDAKGNTLSGRKRRQVARMKREHSRGRFQSK
AERNLAHGLGEVRRIVSALELSETIRDQSCQLFRSAQNENLLCGRSIEAIAAASVYGACR
CNGLSRLRGEVTEMARVAASRVTNAYNMLNKELGLPAEPVVPSMYVPRLASDLNCPDAIH
QRARGLAERAEELGATTGVHPAGFAAACLYTAGLEQGHGLTQAEAADAANISTATIRAHQ
ETIAERAD
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgagagacatctacgacactggcttcgacgaggacattcgaacggactcgagt
gcaaaccactgtcccgaatgcgacggtcgggtcagcaccaacgcgatcgaaacactctgc
gaagactgcggcctggtcatccaggaccagcgtatcgaccacgggccggagtggcgggca
tacgacgaggaggactgcgaacgaacgggggcaccgctgacggccgctcggcacgaccgg
ggcctctcgaccgaaatcggtcgcggtaccgacgcaaaggggaacacactctccgggcgg
aaacgccgccaagtcgcccgaatgaaacgcgagcacagccggggacggtttcagtcgaag
gccgagcggaacctcgcacacgggctcggagaggtccgccggatcgtgagcgcccttgag
ctgtccgaaactattcgtgaccagtcgtgccagctcttccggagtgctcagaacgagaat
ctgctttgtggccgatctatcgaggccatcgccgccgccagcgtatacggagcctgccgg
tgcaatggcctctcgcgattgcgaggcgaggtcacagagatggcccgtgtcgcggcgtcg
cgagtcacgaatgcctacaacatgctgaacaaagaactgggcctccctgccgaacccgtc
gtccccagtatgtacgtaccccgactggcctcagacctcaattgtcccgatgcgatccac
cagcgggcgcggggactcgcggagcgggctgaagaactgggagccacgacaggcgtccat
ccggccgggttcgcagcggcctgcctctacacagccggtctcgagcagggccacgggctg
acgcaagccgaggccgcagacgccgccaacatctcgacggcgaccatccgagcgcatcag
gagacgatcgctgaacgagctgactag
DBGET
integrated database retrieval system
