Halioxenophilus aromaticivorans: R50071_05280
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Entry
R50071_05280 CDS
T10756
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
haro Halioxenophilus aromaticivorans
Brite
KEGG Orthology (KO) [BR:
haro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
haro03009
]
R50071_05280 (dbpA)
Enzymes [BR:
haro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
R50071_05280 (dbpA)
Ribosome biogenesis [BR:
haro03009
]
Prokaryotic type
rRNA helicases
R50071_05280 (dbpA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_19
CMS1
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
BFM05324
LinkDB
All DBs
Position
complement(573201..574583)
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AA seq
460 aa
AA seq
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MTQALFKTLALRPELLSTLKELGYGSMTPIQAQSLPETLQGRDLIAQAKTGSGKTAAFAL
GVLNKLQVDRFRVQTLVLCPTRELADQVATEVRKLARGIHNIKVLTLCGGQPFGPQIGSL
EHGAHIVVGTPGRILEHLTKGNLTLKDVHQLVLDEADRMLDMGFQPALDAIVEQAPTQRQ
TLLFSATYPPEIDAIAARYLSNPVSVTVAETHDSSSIEQRYYHCDNNDARFTALETLLLA
EEPTSAMVFATTKREVQQICDDLRNRDFSVASLHGDLEQKQRDQTLIQFANKSVTILIAT
DVAARGLDIDNVDLVINYQLAHDTDVHVHRVGRTGRAGAMGLACSLFTDKDRIKIEKLED
LNGEPITAATLPRPSSSTPARPQMATLLIDGGKKDKLRPGDIVGALTKDGTLSANQIGKI
HVTATKAFVAVELKLGKTALNKLTEGRLKGRNFRARLLRS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
ttgacacaagctctctttaaaacccttgcccttcgcccagaattactcagcacgttaaaa
gagctggggtacggctccatgacgcccatacaggcgcaaagcttgccagaaacgttgcag
ggccgggatttgatcgcccaagctaaaaccggctctggtaaaaccgccgccttcgctttg
ggtgtacttaacaagctgcaagtggatcggtttcgtgtgcaaacgctggtgctctgcccg
accagagaactggcagaccaagtagccaccgaggtacgaaagttggcccgaggaattcat
aacattaaagtgcttacgctgtgtggtgggcagcccttcgggccgcaaattggctcgctg
gagcacggtgctcatattgttgtgggcacacctgggcgaatcttagaacacctaaccaaa
ggcaaccttaccctgaaggatgtgcaccagcttgtattggatgaagccgatcgcatgctg
gatatgggttttcagcctgcgctggatgccatcgttgagcaggcgccaacccaacggcaa
acgctgttgttcagcgccacctatccgccggaaatcgacgccattgccgcgcgctacctc
agcaatccggtcagcgtcaccgtagcagaaacacacgacagcagcagtattgagcaacgc
tattaccattgcgacaataacgatgcgcgctttaccgcgttagagactttactactggcc
gaagaacccaccagcgcgatggtttttgccactactaaacgggaagttcagcagatatgc
gatgatcttcgtaaccgcgactttagtgtggccagcctacacggcgacttagaacaaaag
cagcgtgaccaaaccctgatacagttcgccaacaaaagcgtcaccattttgattgccacc
gatgtcgccgccagaggattggacatcgacaacgtagacctcgtgattaactatcaactg
gcccacgataccgacgtgcatgtgcaccgagtcggccgcaccggccgtgccggagcaatg
ggcttggcctgctctctttttactgacaaagatcggataaaaatagaaaaactagaagac
ctaaatggtgagcccattacagccgccacattaccaaggccttcctcctcaacacctgca
cgcccgcaaatggcgacactgcttatcgatggcggtaaaaaagacaagttgcgcccaggg
gatatcgtcggcgcgctcaccaaagacggcacactctcggccaatcaaatcggtaaaatt
cacgtcacggcgacaaaggcctttgtcgccgttgagttaaagctgggtaaaacggcgtta
aacaagctcacggaaggtagactgaaaggccgaaattttcgcgcgaggttgctgagaagt
tga
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