Halioxenophilus aromaticivorans: R50071_12710
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Entry
R50071_12710 CDS
T10756
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
haro Halioxenophilus aromaticivorans
Pathway
haro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R50071_12710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haro03019
]
R50071_12710
Enzymes [BR:
haro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
R50071_12710
Messenger RNA biogenesis [BR:
haro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
R50071_12710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
SIX1_SD
DUF5831
Motif
Other DBs
NCBI-ProteinID:
BFM06067
LinkDB
All DBs
Position
1447483..1448844
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AA seq
453 aa
AA seq
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MLKRFISLFTGDSTSSGKVVIPHSKHSIANNDVSRNAIKVIERLQQADFEAYLVGGGVRD
LLLDGHPKDFDVATNATPEQVRKLFRNSRIIGRRFRIVHVRYGREVIEVTTFRSHHQEGS
GKSQESHQSDEGMLLRDNVYGDLQSDAERRDFTINALYYDPVSRDILDYTRGVNDIDARM
LRIIGDPATRFKEDPVRMLRAVRFAAKLGFEIEPKTAAPIADLASMLQNIPAARLWDESM
KLFMSGYSTAIFHQMVERDLFKYLFPGSASHIANPQTMAFFENAMLNTDKRIRADKRVTP
AFIFAVLLWPAVVTRQDELMAEGSSTALQAAHQAQQQVLQAQLNVISIPKRFTSVMREIW
DLQAALPRRNGRRAYRTLEQQRFRAAYDFLLLREQSGEDHQGLGAWWTEFQFADEEKREQ
LIAALPRSGNNSNRRRRKPRRSPGQQNPGQQEG
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaacgctttattagccttttcaccggtgattccaccagtagcggtaaagtggtt
attccgcacagtaaacactccattgccaataatgatgtcagccgtaatgctattaaggtg
attgaacgcctgcagcaagcggattttgaggcctacttggtgggcggtggcgtgcgcgac
ctgttgttagatgggcacccaaaagactttgacgtggccaccaacgccacgcctgaacag
gtgcgcaagttgtttcgcaactcgcgcatcatcggccgcagatttcgcatagtgcatgta
cgctacggccgagaagtgattgaagtgaccaccttccgcagccatcaccaagagggcagt
ggcaaaagccaggagtcacatcagtcggatgagggcatgttgctgcgcgataacgtctac
ggcgatttgcaaagcgatgccgaacgccgcgacttcaccatcaacgccctgtattacgac
ccggtcagccgcgacattctagactacacccgtggtgttaacgacatcgacgcccgtatg
ttgcgcatcattggtgacccggccacccgctttaaagaagacccagtgcgcatgctgcgt
gctgtacgatttgcggccaagctcggctttgaaatagaacccaaaacagctgcccccatt
gctgacctagcctcaatgctgcaaaacatccccgccgcgcgcctgtgggatgagagcatg
aagctgtttatgagcggctattccaccgccatattccaccaaatggtggagcgcgatcta
tttaagtatctgttcccgggcagcgcctcgcacattgccaacccacagaccatggcgttt
tttgaaaacgccatgctcaacaccgacaaacgcatccgcgccgataagcgcgtaacgcct
gcgtttatttttgccgtgttgctgtggcctgcggtggtgacgcgccaggatgagctcatg
gccgagggcagcagtacggcgttacaagccgcccaccaagcccagcagcaggtattgcag
gctcagctgaatgtcatctccattcccaagcgctttaccagcgtaatgcgagaaatttgg
gatctacaagccgcgttgccacgccgcaatggccgccgagcctaccgtaccttagagcaa
cagcgttttagggcagcctatgactttctgttgttgcgcgagcagtccggcgaagaccac
caaggcttaggcgcctggtggactgaattccaatttgccgatgaagaaaagcgcgagcaa
ctgattgcggcattgccgcgcagcggcaacaacagcaaccgtcgccgccgcaagccgcgc
cgcagtcccgggcaacaaaaccctggccaacaagaagggtag
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