Halioxenophilus aromaticivorans: R50071_17040
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Entry
R50071_17040 CDS
T10756
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
haro Halioxenophilus aromaticivorans
Pathway
haro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R50071_17040 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haro03019
]
R50071_17040 (pnp)
03016 Transfer RNA biogenesis [BR:
haro03016
]
R50071_17040 (pnp)
Enzymes [BR:
haro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
R50071_17040 (pnp)
Messenger RNA biogenesis [BR:
haro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
R50071_17040 (pnp)
Transfer RNA biogenesis [BR:
haro03016
]
Prokaryotic type
tRNA degradation factors
R50071_17040 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
S1_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
BFM06500
LinkDB
All DBs
Position
1955862..1957994
Genome browser
AA seq
710 aa
AA seq
DB search
MNPVIKTFQYGNDTVTIETGRVARQATGAVIVTIGDTSVLCTVVGAKEAKENQGFFPLSV
HYQEKSYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPNGFLNEVQVVCTVLSAN
KNVDPDMAAMIGTSAALAISGIPFSGPIGAARVGYTEADGYLLNPTYETIANSELDMVVA
GTKDAVLMVESEANELPEDIMLGAVLYAHQEMQVVIAAVEELVRDAGKPQWEWTAAPVNE
ALKSAVADAMGAGVAEAYRITDKQARYTRLGELRSEAVEKLAAEGSEFSADDVKGEFAKL
EKNTVRSSVVAGQPRIDGRDNKTVRPIAVEVGVLPNAHGSALFTRGETQALVVATLGSTR
DAQIIDALEGERRDNFMLHYNFPPYSVGEAGRMGATGRREIGHGRLARRGVAAVLPSEEA
FPYTMRVVSEITESNGSSSMASVCGSSLALMDAGVPLKSPVAGIAMGLVKEPNGFAVLTD
ILGDEDHLGDMDFKVAGTSQGVTALQMDIKIEGITEEIMEIALQQALDARLHILAEMNKV
IEVSRDSVSQNAPRLETIKVHPDKIRDIIGKGGATIRSITEETGASIDIDDDGTVKVYGQ
GESLQLALDRIAGITAEAEIGEVYEGKVVRIVDFGAFVNFLPGKDGLVHISQIAHERVNN
VSDYLKEGEMIKVKCMDIDNRGRIKLSIKELTEKPSEPEAKAPANGDEDE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcctgtaataaaaacattccaatacggcaatgacaccgtaaccatagaaaccggg
cgagtggctcgtcaggcaaccggtgccgtaatcgtaactattggtgatacttctgtactg
tgtaccgttgttggcgctaaagaagcaaaagaaaaccaaggctttttccctctgtcagta
cactatcaagagaaatcctacgccgctggtaaaatccccggtggtttctttaagcgtgaa
ggccgcccgagtgaaaaagaaactctgacctcgcgcctgatcgaccgtccaattcgccca
cttttccctaatggcttcttaaacgaagtacaagtggtgtgtactgtgctgtctgccaac
aaaaacgttgatccggatatggccgccatgatcggtacttcggcagctttggccatttca
ggcatcccgttcagtggtcctatcggtgccgctcgagtgggttacaccgaagccgacggc
tacctgttaaacccaacctacgaaaccattgccaactctgagttggacatggttgtggct
ggtaccaaagacgccgtattgatggttgagtctgaagctaacgagctgccagaagacatc
atgttaggtgcagtactttacgctcaccaagagatgcaagtggtcattgccgcggttgaa
gagctggtacgtgatgctggtaagcctcagtgggagtggactgcggctcctgtcaacgaa
gcactgaaatccgctgtggctgatgccatgggcgcaggcgttgccgaagcctaccgcatc
actgataagcaagcacgctacacccgtttgggtgagttgcgttctgaggccgtagaaaaa
ctggccgccgaaggcagcgagtttagtgctgacgatgtaaaaggcgagtttgccaagctt
gagaaaaacaccgtgcgttcttccgtggttgctggccagccgcgtatcgatggccgtgac
aacaaaaccgtacgtcctatcgcggttgaagttggcgtactgcctaacgctcacggttct
gcactgtttacccgtggcgagacccaggctctggttgtagctaccttgggctctacccgt
gatgcgcaaattatcgatgctctagaaggcgagcgccgtgacaactttatgctgcactac
aacttccctccttactcggtaggtgaagctggtcgtatgggagctactggtcgtcgtgaa
attggtcacggtcgtttggctcgtcgcggtgtcgctgcggtgctgccaagcgaagaggct
ttcccatataccatgcgtgtcgtgagcgagattaccgaatccaacggttctagctccatg
gcttctgtgtgtggttccagtctagcgttgatggacgccggcgtgccgttgaaatcgcca
gtggccggcattgccatgggcttggttaaagagcctaacggttttgctgtactgactgac
atattgggtgacgaagatcatcttggtgacatggactttaaagttgctggtacctcacaa
ggtgttaccgcactgcaaatggacatcaaaatcgaaggcattaccgaagagatcatggag
atcgctttgcaacaagccttggacgcccgtttgcacatcctggctgagatgaacaaagtt
atcgaagtttctcgtgactctgtgtcgcaaaacgctccgcgtttggagaccatcaaggtt
cacccagataagatccgcgacatcatcggtaaaggcggcgctaccattcgttccatcacc
gaagagactggcgcgtccatcgatatcgacgacgacggtaccgttaaagtatatggccaa
ggcgaatctctgcagttagccctcgaccgcattgccggcattaccgccgaagccgaaatt
ggtgaagtctacgaaggtaaagttgttcgcattgttgatttcggtgcgttcgtaaacttc
ttgccaggtaaagacggtttggtgcacatttctcaaatcgcacacgagcgtgtgaacaat
gtgtctgactacctgaaagaaggcgaaatgatcaaagtgaagtgcatggacatcgacaat
cgtggtcgtattaagctgtccatcaaagagctgactgaaaagccttcagagccagaggcc
aaagcgccagctaacggtgacgaagacgagtaa
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