Halioxenophilus aromaticivorans: R50071_17190
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Entry
R50071_17190 CDS
T10756
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
haro Halioxenophilus aromaticivorans
Brite
KEGG Orthology (KO) [BR:
haro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
haro03009
]
R50071_17190
Enzymes [BR:
haro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
R50071_17190
Ribosome biogenesis [BR:
haro03009
]
Prokaryotic type
rRNA helicases
R50071_17190
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
BFM06515
LinkDB
All DBs
Position
complement(1975992..1977371)
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AA seq
459 aa
AA seq
DB search
MSGPTPEFSALNLSATLLQALAAQELTHATEIQALAVPAVLNKRDIIASAATGSGKTLAF
LLPIVQQLIAQPSPNTGCRALIMVPTRELAEQISNNLKALAKYTRTTFTLLTGGADFKFQ
ASLLRKNPEIIIATPGRLSDHLRNNTTDLTDLEFWVLDEADRMLDMGFTEDIDRVAQALT
DKHQTLMFSATLRHQQVARVAQHLLRDPERLELEHHNQVAAEVHHQFVLSDDVKFKQKAL
DKIIGSGEFKKVIVFTNTKSEANRLRGVLEYYGHQAGCLHGDMTQDQRREILLAFRRHKF
TVLIATDVAARGLDIEKLDAVIHFDMARTPKDYVHRAGRTGRAGKPGTSIALIAPHEWNN
KARAENVVGDGFEKRTLPGLTAKYKGPDKVKSSGRASGKKRDDKKSSDSKTTAKVKPKKR
ARDQANKGRPKRFGPAPKKESVSEGEARLGDGFSPFKKK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
ttgtccggccctacccctgaattcagcgcactcaaccttagcgccacattgttacaagcg
ctggccgcccaggagctaacccacgccacggaaattcaagccttggcagtaccggccgtg
ctcaacaaacgcgatatcatcgccagtgcggccacgggcagcggtaagacactggccttt
ttgctgcccatagtgcagcagttaattgcccagccctcgcccaataccggctgtagagcg
cttataatggtgcccacccgggagctggccgagcagatcagtaataacctaaaagccctg
gcgaaatatacccgcaccacgtttaccctattaaccggcggcgcagactttaagtttcag
gcctccctactgcgtaaaaaccccgaaattatcatcgccacgccgggccggctatccgac
cacctacgcaacaacaccacagacttaaccgacctagagttttgggtgttggacgaagct
gaccgcatgttggatatgggctttaccgaagacattgatcgagtggctcaggcgttaaca
gataaacaccaaactctcatgttttccgccacattgcgccatcaacaggtggcgagagtc
gcccagcatttgctgcgcgacccagagcgcctggagctggaacaccacaaccaagtggcg
gcggaagtgcatcaccaatttgtattaagtgatgacgtaaaatttaaacaaaaggcactg
gataaaatcatcggcagcggtgaattcaaaaaggtcattgtgtttaccaacaccaaatcg
gaggccaaccgtttacgtggcgtgttggaatactacggccaccaagccggctgtttgcat
ggcgacatgacccaagatcaacggcgggaaattctactggcgtttcgtcgtcataaattt
accgtactcatcgccaccgatgtggcagcgcggggcttagacatcgaaaagctggacgcc
gtcattcattttgatatggcgcgcacccccaaggattatgtgcaccgcgcgggccgcacc
ggacgcgctggcaagcccggcaccagcatcgcactgattgcgccccacgagtggaataat
aaagcgcgggccgaaaacgtcgtgggcgacggctttgaaaagcgtaccttacccggctta
accgccaaatataagggcccagataaagttaaatcatctggccgcgccagtggcaaaaaa
cgggatgacaaaaaaagcagcgacagcaaaaccacagccaaggtaaaacccaaaaaacgc
gcccgcgaccaagccaacaaaggccgacccaagcgctttggcccggcacctaaaaaggaa
tccgtgagcgagggcgaagcgcgcttaggcgacggttttagcccttttaaaaagaaataa
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