Halioxenophilus aromaticivorans: R50071_17220
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Entry
R50071_17220 CDS
T10756
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
haro Halioxenophilus aromaticivorans
Brite
Transcription machinery [BR:
haro03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
R50071_17220 (rapA)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BFM06518
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Position
complement(1978575..1981412)
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AA seq
945 aa
AA seq
DB search
MAAEQFVIGQRWISSAEKELGLGVVTDARDRRVSLSFPACGEHRTYADRNAPLTRVKYDV
GDTVYDLDDQAWLVDELQDEGHITYLVTGIDGTQKALSEVELDPFVHFSGPLERLLAGNL
DKPRQFQLRLHTLEHLRRLQASGVGGLLGPRVDLLKHQIYIANEVANRFAPRVLLADEVG
LGKTIEAGLIIHHQRHNHRAQRILIALPDSLVHQWLVEMLRRFNLHFSVMNQARIDDAIE
SGDVNPFDSAQLVLCPISLFTARDENLQLACQCEWDLLCVDEAHHLVWSEQQPSIEYQAV
ESLAKLARGLLLLTATPEQLGLKSHFARLRLLDPDRYHSLEEFRAEEDKYQPINELIQTL
LADDGAAALQSDAGRQQQLAEFIGEDRVTSLMAKLASAEAPSEMIVDTVRELLDRHGTGR
VLFRNTRGSVSGFPQRCLDAVPLDMPAHYDSASLYPEQDQPEDWVELDPRVEWLEQFLKL
NRKQKVLLITASAKTALALESYLTLRQGIRASVFHEGMSLLERDRSAAYFADDEAGAQVL
VCSEIGSEGRNFQFAHHLVLFDLPANPDLLEQRIGRLDRIGQQHDIQIHVPYFEDSSQAV
LLQWYDQGLQAFTQTCPIGGAVKQQVQTELENALADPSNAAACQGLISKTESLAKELIAV
LQSGRDRLLELNSCNPSVAQNIIDQVGEAAQENALQDYMLMAFDQFGVDHQDHSEQTWVL
HPSETMHSPFPELPEDGISVCFNRNKALSREELSFLSWEHPMVTATMDMVASGDHGNCSL
CTLKLPPLKAGTWLLEAVYVVHCPAPKAHQLNRFLPLTPIRVLLDQGGKDLAGVVAGHQL
TGLAKTLPRKTAADIVKHLKPEVEGRLGKAKTNAETQAKALLKSAREALTKEQDAELARM
VALAKVNPNIRAEEISALEEQNAMAENYLKQSQLRLDALRVVVVT
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
ttggctgcggaacaatttgttatcggccagcgctggattagcagtgctgaaaaagaattg
gggttaggcgtagtcaccgacgcccgtgatcggcgagtatccctatcctttcccgcgtgc
ggcgagcaccgcacctacgcggaccgcaacgcccccctgacccgcgttaaatatgacgtc
ggcgacaccgtgtacgacctagacgaccaggcctggctggtggatgaattgcaggacgaa
ggccacattacctacctggtcaccggcatcgatggcacgcaaaaagcgttgagcgaagtt
gagctagacccatttgtgcacttctccgggccattagaaagactgctggccggcaaccta
gacaaaccccgccagtttcaattgcgactgcacacgctggagcatttgcggcgattacag
gcctctggtgtcggcggtttactcggcccaagggtggacttgctaaaacaccaaatctac
atcgccaacgaggttgccaaccgttttgcgccgcgggttctgctggccgacgaagtgggc
ttgggcaaaaccattgaagccggtctgatcatccatcaccagcgccacaaccatcgggcc
cagcgaattttaatcgcgttgccagattccctagtgcaccaatggttagtggaaatgcta
cgccgctttaacctgcacttttcggtgatgaaccaagcccgtatcgacgacgccatagag
agcggcgatgtcaaccccttcgattcagcgcagctggtgctctgtccgatcagcttgttt
accgccagagacgaaaaccttcaactggcctgccagtgcgaatgggatttactgtgtgtg
gatgaggctcaccatttggtttggtctgagcagcagccgagcattgaataccaggcagtg
gaatccctggcaaaactcgcccgcggcctgctactgctaaccgccaccccggagcaactt
gggctgaaaagccacttcgcccgcctgcgtttattggacccagaccgctaccacagcctg
gaagaattccgcgcagaagaagacaagtaccaaccgattaacgagctgattcaaactttg
ctagcagacgatggcgcagccgcgctgcaaagcgacgctggccggcagcaacagctggcc
gaattcatcggcgaggaccgcgttacatcgctgatggccaaattggccagcgccgaggcg
ccgagtgagatgattgttgacactgtgcgcgagttactcgaccgccacggcaccggccgg
gtgctatttcgcaacacccgtggcagcgtcagcggcttcccgcaacgctgcctggatgcc
gtgcccctggatatgccagcccactacgacagcgcctccctctacccggaacaagaccaa
ccggaagactgggtggagctggacccgcgtgtagagtggctggagcaatttctaaaactg
aatcgcaaacaaaaagttctgttgattactgccagtgccaaaacggccctagcgctggaa
tcctatctcaccctgcgccagggcattcgcgccagtgtattccacgagggcatgagcctt
ttagagcgagatcgcagcgcggcctactttgccgatgatgaagccggcgctcaggtattg
gtgtgctctgaaattggcagcgaaggccgtaacttccagttcgcccatcatctggtgttg
ttcgatttgcccgccaaccccgatttactggaacagcgcattggccgcctagatcgcatt
ggccagcagcatgacattcaaattcacgtaccgtattttgaggattccagccaagcggtg
ttgctgcagtggtacgaccaaggcctccaggccttcacccaaacctgccccattggcggc
gcggtgaaacaacaggtgcaaaccgaactggaaaacgccctggccgaccccagcaatgct
gccgcctgccagggcttgataagcaaaaccgaaagcctggccaaagaactgattgccgtt
ctgcaatccggccgagaccgcttattggagcttaactcctgcaacccttccgtggcgcaa
aacattatcgaccaagttggcgaggccgcccaagaaaacgcgctgcaagattatatgcta
atggccttcgaccagttcggtgtcgaccatcaagaccacagcgagcaaacctgggtgctg
cacccctcggaaaccatgcacagcccgtttcctgagttaccggaagacggcatcagcgtg
tgtttcaaccgcaataaggctctgagccgagaagagctgtcgtttctttcctgggagcac
cccatggttaccgccaccatggacatggtcgccagtggcgaccacggcaattgctctttg
tgcaccttaaaactgccgccactcaaagccggcacctggttgctggaagcggtttacgtg
gtccactgcccggcacccaaagcgcatcaattgaatcgcttcctgccgttaacgcctatt
cgtgtattgctggatcaaggtggtaaagacctggccggggtagtggccggtcatcaatta
accgggcttgccaaaaccctgcccagaaaaaccgccgcggatattgtgaaacacctaaag
cccgaagtggaaggccgactgggcaaagccaaaaccaacgccgaaacccaggccaaagcc
ttgctcaagagcgcccgtgaggcactcaccaaagagcaggacgcagagctggcccgcatg
gtggccctggctaaggtcaaccctaacatacgagccgaagaaatttccgccttggaagag
caaaacgccatggcggaaaattacttgaaacaatcgcagctacgcctagacgcgctgcgc
gtggtggtggtcacctag
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