Halioxenophilus aromaticivorans: R50071_19760
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Entry
R50071_19760 CDS
T10756
Symbol
lapB
Name
(GenBank) lipopolysaccharide assembly protein LapB
KO
K19804
lipopolysaccharide assembly protein B
Organism
haro Halioxenophilus aromaticivorans
Brite
KEGG Orthology (KO) [BR:
haro00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
R50071_19760 (lapB)
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Gene cluster
GFIT
Motif
Pfam:
TPR_14
TPR_19
TPR_6
Zn_ribbon_LapB
ARM_TT21_5th
TPR_16
TPR_7
ARM_TT21
TPR_12
TPR_CcmH_CycH
ARM_TT21_C
TPR_11
MOM1
Cupin_NOL9
TPR_30
DUF7129
HypA
Motif
Other DBs
NCBI-ProteinID:
BFM06772
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Position
2258906..2260114
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AA seq
402 aa
AA seq
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MQDFLLYWMLFFAIAAGFFMGRYSRKSPLRIMERYGDKPSPINPDYIRGLNHLLNEDADA
AVDTFTELLPVNDKTLDTHLALGALLRRRGEVGKAIRVHQFLVEHQQLDRQQQEKAQLEL
GLDFLKAGVLDRAEDIFERLQNSSDHDVSIKSLGFLAEIYRDEKEWLNAANAIESLLRKK
PRGHDQKWRSMQAHFYCEEAVSAKTRGDQPLVRKLLAKAAHADPKCVRVSLLMADVELKR
EDYKSAIKCLKRVPEQDPDYIPEILPGLLQSYQALGDIETMIVYLRQLQDDYPSSSVIIS
LADLVNQHESEGAAVALLNQKIDTRPSLRVVGKFLDFHLNKASKEDNNKEQTLVRNMLES
LLEHKSYYNCGSCGFSANHLHWQCPSCKSWGSIKAVKGLEGE
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
ttgcaggactttctgctgtactggatgctgtttttcgcgatcgcggcgggcttttttatg
ggccgttacagccggaaatcaccattgcgtattatggaacgctacggcgataagcccagc
ccgatcaacccggattatatccgcggactgaaccacctcctcaacgaagacgccgatgcc
gctgtggataccttcacagagctgttgccggtcaatgacaagacactggatactcactta
gctctaggcgcgctactgcggcgccgtggggaagtgggtaaagcaattcgcgttcatcag
tttttggtggagcaccaacagttggaccgtcagcagcaggaaaaagcccagcttgagcta
ggtttggacttcctcaaagccggggtactggatcgcgccgaggatatctttgagcggttg
caaaactcgtcggatcacgacgtttccatcaaaagtcttggttttctcgctgaaatctac
cgagatgaaaaagaatggctcaatgcagccaatgccatagaaagccttttgcgcaaaaag
ccaagggggcacgatcagaaatggcgctccatgcaagcacatttttactgcgaagaggct
gtgtcagccaagactcgcggtgatcagcccttggttagaaagctgttggcaaaggccgcc
cacgcagaccctaaatgcgtacgcgtaagcctgttgatggctgatgtcgagctaaagcgc
gaagattacaaaagcgccatcaagtgcttaaagcgagttcctgagcaagaccctgattat
atacctgagatcctgcccggattgctgcaaagctatcaggccctgggcgacatagagacc
atgatcgtatatctgcgccagttgcaggatgattatcccagtagctctgtgatcatttct
ctggccgacctggtgaatcagcatgaaagtgaaggtgctgcggtggccttgttgaatcaa
aagatagatacgcggccatctttgcgggttgtgggcaagttcttagattttcacctgaac
aaggcgtctaaggaagacaacaacaaagagcaaacgctcgtgcgcaatatgttggaatcg
ctcttggagcataaatcctattacaactgcggttcttgtggtttttcggcgaaccatttg
cactggcagtgccctagttgcaaatcttggggctctatcaaagctgttaaggggctggag
ggcgagtag
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