Halioxenophilus aromaticivorans: R50071_26650
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Entry
R50071_26650 CDS
T10756
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
haro Halioxenophilus aromaticivorans
Pathway
haro03030
DNA replication
haro03430
Mismatch repair
haro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R50071_26650 (dnaQ)
03430 Mismatch repair
R50071_26650 (dnaQ)
03440 Homologous recombination
R50071_26650 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
haro03032
]
R50071_26650 (dnaQ)
03400 DNA repair and recombination proteins [BR:
haro03400
]
R50071_26650 (dnaQ)
Enzymes [BR:
haro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R50071_26650 (dnaQ)
DNA replication proteins [BR:
haro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R50071_26650 (dnaQ)
DNA repair and recombination proteins [BR:
haro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R50071_26650 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BFM07461
LinkDB
All DBs
Position
complement(3063840..3064559)
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AA seq
239 aa
AA seq
DB search
MRQIVLDTETTGIDPKQGHKIIEIGCVEMVGRKLTSRHYHQYINPEREVEQEAIDVHGIT
NEFLVDKPRFNQVAEEFLAFVKGAQLVIHNAPFDIGFIDHEFRLLNPNFGSILDVCTVVD
TLALAREKHPGQKNNLDALCKRYFVDNSARELHGALLDSEILADVYLLMTGGQTSLGLGT
GSQNSDSDSSGGSAIRRLAADRKSTPVILASADELAAHEQALDAVAKQSGGEVLWRQTH
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtgagacagatagtactggataccgaaaccacaggtatcgacccgaaacaaggccacaaa
atcattgaaattggttgcgtagagatggttggtcgaaagttgaccagccggcattatcac
caatacatcaacccagagcgtgaagtcgagcaagaagccattgatgtgcacggcatcacc
aacgagtttttggtcgataagcctcggttcaaccaagttgccgaggaatttctggctttc
gtcaaaggggctcagttggtcattcacaacgcgccctttgatatcggcttcattgatcac
gaatttcgcttgctcaaccccaatttcgggtcaattttagatgtatgtacggtagtggat
acccttgctctggcgcgcgagaaacatccaggccaaaaaaataacttggatgctttgtgt
aagcggtactttgtagataactccgcgcgtgagttacacggtgcattgctcgattccgag
attctagcagacgtttatttgttgatgacgggcggtcagacgtcgcttggattgggcact
ggtagccagaattctgacagcgacagttctggcggatctgccattcgacgtttagccgcg
gatcgcaaatctactcctgtgattttggctagcgccgatgagttggcggcccacgaacag
gctttagacgccgtggctaaacaatcgggtggggaggtgctttggcgccaaacccattaa
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