KEGG   Halioxenophilus aromaticivorans: R50071_37590
Entry
R50071_37590      CDS       T10756                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
haro  Halioxenophilus aromaticivorans
Pathway
haro03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:haro00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    R50071_37590 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:haro02044]
    R50071_37590 (tssM)
Secretion system [BR:haro02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   R50071_37590 (tssM)
SSDB
Motif
Pfam: IcmF-related IcmF-related_N IcmF_C IcmF_helical DUF4131 AmpE AAA_22 nSTAND3 Viral_helicase1
Other DBs
NCBI-ProteinID: BFM08555
LinkDB
Position
complement(4414301..4417828)
AA seq 1175 aa
MGKIFKALRKPWLLSLLALVLLSLVIWFVGPLVAIADKVLLASAQSRLLLIMVALLCWGL
NNLRLRQQDTKASQALTEGLQADAAAQPETRSKVNPDEQMLHQRLQDSLALLKGSAFERE
GKLYKLPWYIIIGAPGSGKTTAIQNSGLQFPLSDAIGNEPIKGEGGTRYCDWWFTDEAIL
IDTAGRYTTQDNPAQVESSAWLGFLSRIKKARPKRPLNGIIVTISVQDVLAKTATQKSLQ
ITAIKQRIQELNNHLQMQLPVYVLFSKMDKVAGFGSFFSDMEKQDRSQIWGFSAPARPST
DIDAWFEQEFSQLVAQLYGQVNHRLNRETSQQKRCLVSEFPRQMQALRGLLQEYVSSIFS
TNQFESPLLLRGVFFISGTQTDTVSQWVTSLAPVELMAPPVDHTGQDTKPYFVQNLLKNF
IFAESNVATVNQRVTQRFRVAYSALLLASLGGFAGGLFAWTNSKNLNEQYLDQSDQAIDL
YYESTNGGLDKPHSWSVLNEGLNLLKHLPTGFEEKDSLYTWPQGFGLYQGDKIGAQAQTT
YVEGLSAFFMDDFSRLLLEQIAESFDDDERLYEALKFYLMLYQPEHLEQDSLLAWAQVLW
QRSLPGEHHQALRDQLGEHLITALEQGALPTDFDEHAVATAREALVATPLDMRAYRRIKN
DHLANHPEQFNVQGVLGKRAKQLFTRRSGLPLSQGVPAFFTYEGFHAGFNVASVNLAKKL
ADEQWIYGDTLAKSISDTDLEEIKSSVYQQYLYEYQTRWDYFLNDLSLLPFGTVTRGKTV
VRLLASADEPLIMLLKAIRKHTALAEAPGVDKETVQALGRVAENVASSQKSRLERLVPTE
LIAKKAKLPGQDIDRYFSELNSYTAEDGSAALLSLQEAIYGLNNYLQKLLYAEDLGQAAF
ASTSGGTQKQALMQLQISVDEAPPQLQGWFQSLGKNTQKVAQVATQSHINTSWQSDVLAF
YEQHLQGRYPLDKTSQEDIKLTDFVAFFGPGGVLDSYFKQYLAPYVDTRSQPWRWRKPTG
MSAKVLEFFQRADSVRQAFFAGSENLNVAFSLKPHTLDRIASNLSLDISGANLNYHHGPP
KSQSFQWPGEDPSDNQLSFSLVSRGTPISVRGDGDWGWFRLLDQYASFDAGAEPGTVMLT
FAVNGIETTQELHPSTRVHPFDPALMSELSLPERL
NT seq 3528 nt   +upstreamnt  +downstreamnt
atgggtaaaatattcaaagccctaagaaaaccatggctgctgtcgctgttggccttggtt
ttgttgtctttggtcatttggtttgtaggaccattggtggctattgccgataaggtgctt
ctcgcctctgcccagtcgcgattactactaataatggtggcgttgctgtgttgggggtta
aataatctacgattgcgtcagcaggataccaaggccagtcaggcgcttaccgaggggcta
caggcagacgcggccgcacaaccagagacccgctctaaggttaacccggatgagcagatg
ttacatcagcgcctccaagacagcttagcgttgctgaaaggctccgcctttgagcgcgag
ggcaagttgtacaagttaccttggtatatcatcatcggtgcccctggctctggcaaaacc
accgccattcaaaattccgggctgcagtttccgctgagcgatgccattggcaatgagcct
atcaaaggtgaaggcggcacacgctattgtgattggtggtttactgatgaagctatctta
attgatacagcagggcgatataccactcaagataacccggcgcaggtagaatcgtcagct
tggttagggtttctcagccgaataaaaaaagcccggccaaagcggccgctaaatggcatc
atcgttaccattagcgtgcaggatgttctggctaaaactgcaacgcaaaaaagcctacaa
atcaccgccattaaacagcgcatacaggagctgaataaccatttgcagatgcagttgccg
gtgtatgtcctgtttagcaaaatggacaaagtggctgggtttggcagttttttcagcgat
atggaaaaacaagatcgatcgcagatttgggggttttccgcgccggctcggcccagtaca
gatattgatgcgtggtttgagcaagaatttagtcagcttgtggcgcagttatatggccaa
gtcaatcatcgccttaatagagaaacgagccagcaaaagcgctgcttggtaagtgaattt
ccacggcaaatgcaagccttacggggattgctgcaggaatatgtcagctcgatattctcc
accaatcaattcgaatcgccactgctgctacggggcgtgttttttatcagtggtacccaa
acagatacggtatcgcaatgggtaaccagtttggcgcccgtagagctgatggcaccaccg
gtggaccatacagggcaagatacaaagccgtactttgtgcagaatcttttaaaaaatttt
atttttgccgagtctaacgttgcaacggttaaccagcgagtcacgcagcgtttcagggtc
gcttattcggcgttgctgttggcaagtttgggtgggtttgccggcggcttgtttgcttgg
accaatagcaaaaatctcaacgagcagtacttggatcagtccgaccaagccatagatctt
tattacgagtctaccaacggtgggctcgataaaccccatagttggtcggttctaaacgag
gggttgaacctgctcaagcatttacccacagggtttgaggaaaaagacagcctgtacact
tggccgcagggttttggtctttatcaaggcgataagattggcgctcaggcccagacgacc
tacgtcgaagggctatcagccttttttatggacgattttagtcggctgcttttagaacag
atcgccgagtcgtttgacgacgatgagcgcttgtatgaggcgcttaagttttacttaatg
ctgtatcaaccagagcatttggagcaagatagccttcttgcctgggcccaggtgctgtgg
caaaggagtctgcccggcgagcatcaccaagccctacgagaccaattaggtgagcatcta
attaccgcgctagagcagggcgcgctaccgacggattttgatgagcatgcggtggccact
gcccgggaagccttggtggctacgccgctggatatgcgcgcctatcgacggatcaaaaac
gatcacctagccaatcatccagagcagttcaatgtacaaggggtgttgggcaagcgggcc
aagcaattgttcactcggcgcagtggcttacctttgtcgcagggagtgccagcatttttt
acctacgaaggcttccacgctgggtttaatgtggccagtgttaacttagctaagaagctc
gccgacgaacaatggatttacggtgataccttggctaaatccatttccgataccgattta
gaagaaattaaaagcagtgtgtatcaacagtatctatatgagtaccaaacacgctgggat
tattttttaaacgatttatcactgctgccgtttggcactgttacgcggggcaaaaccgtg
gtgcgcctgttggccagtgccgatgaaccgttaatcatgttacttaaggcgattcgaaag
cataccgcactagccgaggcacctggagtggataaagaaacggtgcaggcactggggcgg
gttgccgaaaacgtcgctagtagtcaaaagagtcgtttagagcgcttagtgcctacagaa
ttaattgccaaaaaagcaaaactacctggccaagacatagatcggtatttttctgagcta
aacagttacaccgccgaagacggcagtgccgctttgctaagcttacaggaggcgatttac
ggcctaaataattatctgcaaaaattgctctacgccgaagacctaggccaagccgcgttt
gccagtaccagtggtggtacgcaaaagcaggccttaatgcaattacaaatatcggtagat
gaggcgccacctcaattgcagggttggttccaaagccttggaaaaaatacccaaaaagtt
gctcaggtggctacgcaaagccatattaatacttcttggcaaagtgacgtactggcgttt
tacgagcaacatctacagggccgatacccgctcgataaaaccagccaagaagacattaaa
ttaacagactttgtggcattttttggcccaggtggtgtgttagattcttactttaagcaa
tatttggcgccctacgtcgatacccgcagccagccctggcgttggaggaagcccacgggc
atgagcgcaaaagtgttggagtttttccagcgcgcagactccgtacgtcaagcgtttttc
gccggtagtgaaaatctcaatgttgctttttcgcttaagcctcacaccttggacagaata
gccagcaatttatccttggacatcagcggtgccaatttaaattaccatcacggcccaccc
aaaagccaaagcttccaatggcccggtgaagatccttcggacaatcaactgagttttagt
ttagtgagccgtggtacccccatcagtgtgcgtggtgatggagactggggttggtttcgg
ctattggatcaatacgccagtttcgatgccggggcagagccgggcacagtaatgcttacc
tttgccgttaatggaattgaaaccacacaagagctacacccatcaacccgggtgcatccg
ttcgacccagcattaatgagcgaattaagtttgccggagcggttgtaa

DBGET integrated database retrieval system